Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gm26047-201ENSMUST00000157308 113 ntBASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gm37826-201ENSMUST00000195329 322 ntBASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gm26047-202ENSMUST00000198840 115 ntBASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 AC154759.1-201ENSMUST00000224137 1159 ntBASIC16.42■□□□□ 0.22
Zc3h13E9Q784 AC158392.3-201ENSMUST00000224271 1284 ntBASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gm9415-201ENSMUST00000200462 1321 ntBASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h13E9Q784 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Gm4868-201ENSMUST00000164138 789 ntBASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Gm5996-201ENSMUST00000211110 718 ntBASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 AC142266.1-201ENSMUST00000228107 415 ntBASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h13E9Q784 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Gm13171-201ENSMUST00000117233 391 ntBASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Gm9081-201ENSMUST00000182346 991 ntBASIC16.4■□□□□ 0.22
Zc3h13E9Q784 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC16.4■□□□□ 0.22
Zc3h13E9Q784 AC121357.1-201ENSMUST00000227365 608 ntBASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h13E9Q784 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Zc3h13E9Q784 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Zc3h13E9Q784 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Gm24279-201ENSMUST00000104236 131 ntBASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC16.39■□□□□ 0.21
Zc3h13E9Q784 AC162932.1-201ENSMUST00000219209 872 ntBASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Gm18983-201ENSMUST00000222884 2729 ntBASIC16.39■□□□□ 0.21
Zc3h13E9Q784 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms