Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.64□□□□□ -0.07
Ube4aE9Q735 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.64□□□□□ -0.07
Ube4aE9Q735 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.64□□□□□ -0.07
Ube4aE9Q735 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4aE9Q735 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm15573-201ENSMUST00000119487 540 ntBASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm12208-201ENSMUST00000122004 163 ntBASIC14.63□□□□□ -0.07
Ube4aE9Q735 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.63□□□□□ -0.07
Ube4aE9Q735 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm5714-201ENSMUST00000197343 566 ntBASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm45398-201ENSMUST00000210561 165 ntBASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm2553-201ENSMUST00000215986 605 ntBASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.63□□□□□ -0.07
Ube4aE9Q735 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.63□□□□□ -0.07
Ube4aE9Q735 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Ube4aE9Q735 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.63□□□□□ -0.07
Ube4aE9Q735 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm15207-201ENSMUST00000119259 442 ntBASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm14460-201ENSMUST00000121511 639 ntBASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm14665-201ENSMUST00000122294 557 ntBASIC14.62□□□□□ -0.07
Ube4aE9Q735 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm19287-201ENSMUST00000203190 358 ntBASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm45550-201ENSMUST00000209380 946 ntBASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm6867-201ENSMUST00000219165 425 ntBASIC14.62□□□□□ -0.07
Ube4aE9Q735 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.62□□□□□ -0.07
Ube4aE9Q735 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4aE9Q735 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms