Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.73□□□□□ -0.37
Scn1aA2APX8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.73□□□□□ -0.37
Scn1aA2APX8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gm12501-201ENSMUST00000119163 529 ntBASIC12.72□□□□□ -0.37
Scn1aA2APX8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gm9192-201ENSMUST00000183221 985 ntBASIC12.72□□□□□ -0.37
Scn1aA2APX8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gm3786-201ENSMUST00000202659 378 ntBASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.72□□□□□ -0.37
Scn1aA2APX8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gm4310-201ENSMUST00000177847 889 ntBASIC12.72□□□□□ -0.37
Scn1aA2APX8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gm37246-201ENSMUST00000192665 835 ntBASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.72□□□□□ -0.37
Scn1aA2APX8 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Scn1aA2APX8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.71□□□□□ -0.37
Scn1aA2APX8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Gm13035-201ENSMUST00000117496 342 ntBASIC12.71□□□□□ -0.37
Scn1aA2APX8 Gm14724-201ENSMUST00000118400 537 ntBASIC12.71□□□□□ -0.37
Scn1aA2APX8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Gm11331-201ENSMUST00000119764 288 ntBASIC12.71□□□□□ -0.37
Scn1aA2APX8 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.71□□□□□ -0.37
Scn1aA2APX8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.71□□□□□ -0.37
Scn1aA2APX8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn1aA2APX8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn1aA2APX8 Gm11941-201ENSMUST00000119904 610 ntBASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms