Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Gm30285-201ENSMUST00000214614 422 ntBASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pkd2l1A2A259 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12□□□□□ -0.49
Pkd2l1A2A259 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12□□□□□ -0.49
Pkd2l1A2A259 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Cog3-203ENSMUST00000227473 4197 ntBASIC12□□□□□ -0.49
Pkd2l1A2A259 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Snord83b-201ENSMUST00000104546 94 ntBASIC12□□□□□ -0.49
Pkd2l1A2A259 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Gm26956-201ENSMUST00000182176 986 ntBASIC12□□□□□ -0.49
Pkd2l1A2A259 Gm8176-201ENSMUST00000191297 1099 ntBASIC12□□□□□ -0.49
Pkd2l1A2A259 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12□□□□□ -0.49
Pkd2l1A2A259 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pkd2l1A2A259 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Gm5780-201ENSMUST00000217774 1834 ntBASIC12□□□□□ -0.49
Pkd2l1A2A259 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pkd2l1A2A259 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Gm22121-201ENSMUST00000175148 54 ntBASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Mir5132-201ENSMUST00000175166 71 ntBASIC11.99□□□□□ -0.49
Pkd2l1A2A259 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.99□□□□□ -0.49
Pkd2l1A2A259 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms