Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.02□□□□□ -0.81
Trav18A0A075B656 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm4984-201ENSMUST00000115987 360 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm12390-201ENSMUST00000117897 397 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm12314-201ENSMUST00000118104 538 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm13736-201ENSMUST00000119272 253 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm3890-201ENSMUST00000182416 207 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm35960-201ENSMUST00000202712 767 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm39404-201ENSMUST00000216350 313 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm45930-201ENSMUST00000221330 292 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.01□□□□□ -0.81
Trav18A0A075B656 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav18A0A075B656 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav18A0A075B656 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10□□□□□ -0.81
Trav18A0A075B656 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10□□□□□ -0.81
Trav18A0A075B656 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav18A0A075B656 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10□□□□□ -0.81
Trav18A0A075B656 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10□□□□□ -0.81
Trav18A0A075B656 Gm2639-201ENSMUST00000156881 1297 ntBASIC10□□□□□ -0.81
Trav18A0A075B656 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav18A0A075B656 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav18A0A075B656 Gm44958-201ENSMUST00000203734 736 ntBASIC10□□□□□ -0.81
Trav18A0A075B656 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10□□□□□ -0.81
Trav18A0A075B656 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10□□□□□ -0.81
Trav18A0A075B656 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav18A0A075B656 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10□□□□□ -0.81
Trav18A0A075B656 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav18A0A075B656 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms