Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5-4A0A075B652 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Gm12390-201ENSMUST00000117897 397 ntBASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Gm8602-201ENSMUST00000184045 607 ntBASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Gm5904-201ENSMUST00000210286 865 ntBASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5-4A0A075B652 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav5-4A0A075B652 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms