Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5538W4VSP6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.28■■□□□ 1
Gm5538W4VSP6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Gm5538W4VSP6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5538W4VSP6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5538W4VSP6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5538W4VSP6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5538W4VSP6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5538W4VSP6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5538W4VSP6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.27■■□□□ 1
Gm5538W4VSP6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.27■■□□□ 1
Gm5538W4VSP6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5538W4VSP6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm5538W4VSP6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Gm5538W4VSP6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5538W4VSP6 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.26■□□□□ 0.99
Gm5538W4VSP6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5538W4VSP6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5538W4VSP6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Gm15546-201ENSMUST00000122095 826 ntBASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5538W4VSP6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5538W4VSP6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
Gm5538W4VSP6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5538W4VSP6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5538W4VSP6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Gm5538W4VSP6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5538W4VSP6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5538W4VSP6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5538W4VSP6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5538W4VSP6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5538W4VSP6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
Gm5538W4VSP6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5538W4VSP6 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.23■□□□□ 0.99
Gm5538W4VSP6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5538W4VSP6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5538W4VSP6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Gm10399-202ENSMUST00000202768 748 ntBASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5538W4VSP6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gm5538W4VSP6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5538W4VSP6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5538W4VSP6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5538W4VSP6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5538W4VSP6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5538W4VSP6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Gm5538W4VSP6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5538W4VSP6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5538W4VSP6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5538W4VSP6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5538W4VSP6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.2■□□□□ 0.98
Gm5538W4VSP6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5538W4VSP6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5538W4VSP6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5538W4VSP6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5538W4VSP6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.2■□□□□ 0.98
Gm5538W4VSP6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Gm5538W4VSP6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5538W4VSP6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5538W4VSP6 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.18■□□□□ 0.98
Gm5538W4VSP6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gm5538W4VSP6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5538W4VSP6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5538W4VSP6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Gm5538W4VSP6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5538W4VSP6 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms