Protein–RNA interactions for Protein: S4R185

Gm26938, Predicted gene, 26938 (Fragment), mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm26938S4R185 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Gm11599-201ENSMUST00000118720 878 ntBASIC15.28■□□□□ 0.04
Gm26938S4R185 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.28■□□□□ 0.04
Gm26938S4R185 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.28■□□□□ 0.04
Gm26938S4R185 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm26938S4R185 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm26938S4R185 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Gm26938S4R185 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm26938S4R185 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gm26938S4R185 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Gm26938S4R185 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Gm26938S4R185 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.27■□□□□ 0.04
Gm26938S4R185 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm26938S4R185 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm26938S4R185 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.27■□□□□ 0.03
Gm26938S4R185 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm26938S4R185 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm26938S4R185 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm26938S4R185 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gm26938S4R185 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm26938S4R185 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm26938S4R185 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm26938S4R185 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm26938S4R185 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm26938S4R185 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm26938S4R185 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm26938S4R185 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm26938S4R185 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm26938S4R185 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm26938S4R185 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm26938S4R185 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm26938S4R185 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm26938S4R185 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm26938S4R185 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm26938S4R185 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.25■□□□□ 0.03
Gm26938S4R185 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.25■□□□□ 0.03
Gm26938S4R185 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm26938S4R185 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm26938S4R185 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.25■□□□□ 0.03
Gm26938S4R185 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Gm26938S4R185 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Gm26938S4R185 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm26938S4R185 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gm26938S4R185 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm26938S4R185 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm26938S4R185 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm26938S4R185 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm26938S4R185 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm26938S4R185 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm26938S4R185 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm26938S4R185 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.24■□□□□ 0.03
Gm26938S4R185 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm26938S4R185 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm26938S4R185 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm26938S4R185 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm26938S4R185 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm26938S4R185 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Gm26938S4R185 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.23■□□□□ 0.03
Gm26938S4R185 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Gm26938S4R185 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm26938S4R185 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm26938S4R185 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm26938S4R185 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm26938S4R185 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm26938S4R185 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm26938S4R185 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm26938S4R185 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm26938S4R185 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Gm26938S4R185 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm26938S4R185 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm26938S4R185 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm26938S4R185 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms