Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk1bQ9Z2C6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Upk1bQ9Z2C6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk1bQ9Z2C6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk1bQ9Z2C6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Upk1bQ9Z2C6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk1bQ9Z2C6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk1bQ9Z2C6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Upk1bQ9Z2C6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Upk1bQ9Z2C6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Upk1bQ9Z2C6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1bQ9Z2C6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1bQ9Z2C6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1bQ9Z2C6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1bQ9Z2C6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.26■□□□□ 0.67
Upk1bQ9Z2C6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1bQ9Z2C6 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.26■□□□□ 0.67
Upk1bQ9Z2C6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1bQ9Z2C6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1bQ9Z2C6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Gm6311-201ENSMUST00000073790 878 ntBASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1bQ9Z2C6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1bQ9Z2C6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1bQ9Z2C6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1bQ9Z2C6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1bQ9Z2C6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1bQ9Z2C6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1bQ9Z2C6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1bQ9Z2C6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1bQ9Z2C6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1bQ9Z2C6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1bQ9Z2C6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Upk1bQ9Z2C6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1bQ9Z2C6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1bQ9Z2C6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.21■□□□□ 0.67
Upk1bQ9Z2C6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1bQ9Z2C6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.21■□□□□ 0.67
Upk1bQ9Z2C6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Upk1bQ9Z2C6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.21■□□□□ 0.66
Upk1bQ9Z2C6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Upk1bQ9Z2C6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1bQ9Z2C6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Upk1bQ9Z2C6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Upk1bQ9Z2C6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upk1bQ9Z2C6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upk1bQ9Z2C6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1bQ9Z2C6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.17■□□□□ 0.66
Upk1bQ9Z2C6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms