Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gpc6Q9R087 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gpc6Q9R087 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Gpc6Q9R087 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gpc6Q9R087 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gpc6Q9R087 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gpc6Q9R087 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.19■□□□□ 0.66
Gpc6Q9R087 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gpc6Q9R087 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gpc6Q9R087 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gpc6Q9R087 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gpc6Q9R087 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gpc6Q9R087 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.19■□□□□ 0.66
Gpc6Q9R087 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Gpc6Q9R087 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gpc6Q9R087 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gpc6Q9R087 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gpc6Q9R087 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gpc6Q9R087 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gpc6Q9R087 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gpc6Q9R087 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gpc6Q9R087 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gpc6Q9R087 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gpc6Q9R087 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gpc6Q9R087 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gpc6Q9R087 Golph3-202ENSMUST00000226517 2359 ntBASIC19.17■□□□□ 0.66
Gpc6Q9R087 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gpc6Q9R087 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gpc6Q9R087 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.17■□□□□ 0.66
Gpc6Q9R087 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.17■□□□□ 0.66
Gpc6Q9R087 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gpc6Q9R087 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gpc6Q9R087 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.16■□□□□ 0.66
Gpc6Q9R087 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gpc6Q9R087 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gpc6Q9R087 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gpc6Q9R087 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.16■□□□□ 0.66
Gpc6Q9R087 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gpc6Q9R087 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gpc6Q9R087 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gpc6Q9R087 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gpc6Q9R087 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Gpc6Q9R087 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gpc6Q9R087 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.15■□□□□ 0.66
Gpc6Q9R087 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gpc6Q9R087 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gpc6Q9R087 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Gpc6Q9R087 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gpc6Q9R087 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gpc6Q9R087 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gpc6Q9R087 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Gpc6Q9R087 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.14■□□□□ 0.65
Gpc6Q9R087 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gpc6Q9R087 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Gpc6Q9R087 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.14■□□□□ 0.65
Gpc6Q9R087 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gpc6Q9R087 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gpc6Q9R087 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Gpc6Q9R087 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gpc6Q9R087 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gpc6Q9R087 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gpc6Q9R087 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gpc6Q9R087 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.13■□□□□ 0.65
Gpc6Q9R087 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gpc6Q9R087 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.13■□□□□ 0.65
Gpc6Q9R087 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gpc6Q9R087 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gpc6Q9R087 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Gm11175-201ENSMUST00000116172 543 ntBASIC19.11■□□□□ 0.65
Gpc6Q9R087 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Gm27502-201ENSMUST00000183495 199 ntBASIC19.11■□□□□ 0.65
Gpc6Q9R087 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gpc6Q9R087 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gpc6Q9R087 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gpc6Q9R087 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Gpc6Q9R087 Gm14523-201ENSMUST00000117260 558 ntBASIC19.1■□□□□ 0.65
Gpc6Q9R087 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gpc6Q9R087 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Gpc6Q9R087 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gpc6Q9R087 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gpc6Q9R087 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gpc6Q9R087 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.09■□□□□ 0.65
Gpc6Q9R087 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms