Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msh5Q9QUM7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh5Q9QUM7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh5Q9QUM7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.03■□□□□ 0.96
Msh5Q9QUM7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Msh5Q9QUM7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Msh5Q9QUM7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh5Q9QUM7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Msh5Q9QUM7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh5Q9QUM7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Msh5Q9QUM7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh5Q9QUM7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.02■□□□□ 0.96
Msh5Q9QUM7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh5Q9QUM7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh5Q9QUM7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh5Q9QUM7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Msh5Q9QUM7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Msh5Q9QUM7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Msh5Q9QUM7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Msh5Q9QUM7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh5Q9QUM7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Msh5Q9QUM7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh5Q9QUM7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Msh5Q9QUM7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Msh5Q9QUM7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh5Q9QUM7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Msh5Q9QUM7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21■□□□□ 0.95
Msh5Q9QUM7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Msh5Q9QUM7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh5Q9QUM7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh5Q9QUM7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh5Q9QUM7 Gm13238-201ENSMUST00000117655 780 ntBASIC21■□□□□ 0.95
Msh5Q9QUM7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh5Q9QUM7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh5Q9QUM7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21■□□□□ 0.95
Msh5Q9QUM7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21■□□□□ 0.95
Msh5Q9QUM7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21■□□□□ 0.95
Msh5Q9QUM7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh5Q9QUM7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh5Q9QUM7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Msh5Q9QUM7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh5Q9QUM7 Gm45444-201ENSMUST00000211394 898 ntBASIC20.99■□□□□ 0.95
Msh5Q9QUM7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh5Q9QUM7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh5Q9QUM7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh5Q9QUM7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh5Q9QUM7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh5Q9QUM7 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.97■□□□□ 0.95
Msh5Q9QUM7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Msh5Q9QUM7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh5Q9QUM7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Msh5Q9QUM7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Msh5Q9QUM7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh5Q9QUM7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.97■□□□□ 0.95
Msh5Q9QUM7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh5Q9QUM7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms