Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tdp2Q9JJX7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tdp2Q9JJX7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tdp2Q9JJX7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp2Q9JJX7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp2Q9JJX7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp2Q9JJX7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp2Q9JJX7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Tdp2Q9JJX7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp2Q9JJX7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp2Q9JJX7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Tdp2Q9JJX7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp2Q9JJX7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp2Q9JJX7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp2Q9JJX7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp2Q9JJX7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.48■□□□□ 0.87
Tdp2Q9JJX7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp2Q9JJX7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp2Q9JJX7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp2Q9JJX7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp2Q9JJX7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp2Q9JJX7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp2Q9JJX7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.46■□□□□ 0.87
Tdp2Q9JJX7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp2Q9JJX7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp2Q9JJX7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp2Q9JJX7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp2Q9JJX7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.45■□□□□ 0.86
Tdp2Q9JJX7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp2Q9JJX7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp2Q9JJX7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp2Q9JJX7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp2Q9JJX7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp2Q9JJX7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp2Q9JJX7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Tdp2Q9JJX7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tdp2Q9JJX7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp2Q9JJX7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp2Q9JJX7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp2Q9JJX7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tdp2Q9JJX7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp2Q9JJX7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp2Q9JJX7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp2Q9JJX7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.41■□□□□ 0.86
Tdp2Q9JJX7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.41■□□□□ 0.86
Tdp2Q9JJX7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp2Q9JJX7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tdp2Q9JJX7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.4■□□□□ 0.86
Tdp2Q9JJX7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tdp2Q9JJX7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tdp2Q9JJX7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tdp2Q9JJX7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tdp2Q9JJX7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms