Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.88■■□□□ 1.09
Scn5aQ9JJV9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scn5aQ9JJV9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn5aQ9JJV9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 Gm26571-201ENSMUST00000181399 666 ntBASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn5aQ9JJV9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn5aQ9JJV9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn5aQ9JJV9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn5aQ9JJV9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.86■■□□□ 1.09
Scn5aQ9JJV9 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.86■■□□□ 1.09
Scn5aQ9JJV9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scn5aQ9JJV9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn5aQ9JJV9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn5aQ9JJV9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scn5aQ9JJV9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn5aQ9JJV9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn5aQ9JJV9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Scn5aQ9JJV9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Scn5aQ9JJV9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn5aQ9JJV9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Scn5aQ9JJV9 Gm29257-201ENSMUST00000186115 639 ntBASIC21.84■■□□□ 1.09
Scn5aQ9JJV9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scn5aQ9JJV9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn5aQ9JJV9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn5aQ9JJV9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn5aQ9JJV9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scn5aQ9JJV9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn5aQ9JJV9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn5aQ9JJV9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Scn5aQ9JJV9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn5aQ9JJV9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn5aQ9JJV9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn5aQ9JJV9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Scn5aQ9JJV9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scn5aQ9JJV9 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.82■■□□□ 1.08
Scn5aQ9JJV9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn5aQ9JJV9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.81■■□□□ 1.08
Scn5aQ9JJV9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn5aQ9JJV9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Scn5aQ9JJV9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn5aQ9JJV9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.8■■□□□ 1.08
Scn5aQ9JJV9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn5aQ9JJV9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scn5aQ9JJV9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn5aQ9JJV9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Scn5aQ9JJV9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn5aQ9JJV9 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.8■■□□□ 1.08
Scn5aQ9JJV9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scn5aQ9JJV9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Scn5aQ9JJV9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn5aQ9JJV9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn5aQ9JJV9 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.79■■□□□ 1.08
Scn5aQ9JJV9 Gm7143-201ENSMUST00000222811 859 ntBASIC21.79■■□□□ 1.08
Scn5aQ9JJV9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn5aQ9JJV9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
Scn5aQ9JJV9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Scn5aQ9JJV9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn5aQ9JJV9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.78■■□□□ 1.08
Scn5aQ9JJV9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.78■■□□□ 1.08
Scn5aQ9JJV9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn5aQ9JJV9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Scn5aQ9JJV9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn5aQ9JJV9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn5aQ9JJV9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.77■■□□□ 1.08
Scn5aQ9JJV9 Gm8493-201ENSMUST00000196881 489 ntBASIC21.77■■□□□ 1.08
Scn5aQ9JJV9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.77■■□□□ 1.08
Scn5aQ9JJV9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn5aQ9JJV9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.77■■□□□ 1.07
Scn5aQ9JJV9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Scn5aQ9JJV9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Scn5aQ9JJV9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Scn5aQ9JJV9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn5aQ9JJV9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Scn5aQ9JJV9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Scn5aQ9JJV9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn5aQ9JJV9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scn5aQ9JJV9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Scn5aQ9JJV9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn5aQ9JJV9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Scn5aQ9JJV9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn5aQ9JJV9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn5aQ9JJV9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Scn5aQ9JJV9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn5aQ9JJV9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Scn5aQ9JJV9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn5aQ9JJV9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn5aQ9JJV9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn5aQ9JJV9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scn5aQ9JJV9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.73■■□□□ 1.07
Scn5aQ9JJV9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scn5aQ9JJV9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Scn5aQ9JJV9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms