Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rcl1Q9JJT0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.4■□□□□ 0.38
Rcl1Q9JJT0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rcl1Q9JJT0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.4■□□□□ 0.38
Rcl1Q9JJT0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rcl1Q9JJT0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rcl1Q9JJT0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rcl1Q9JJT0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rcl1Q9JJT0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rcl1Q9JJT0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rcl1Q9JJT0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rcl1Q9JJT0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rcl1Q9JJT0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rcl1Q9JJT0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rcl1Q9JJT0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rcl1Q9JJT0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rcl1Q9JJT0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.39■□□□□ 0.37
Rcl1Q9JJT0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rcl1Q9JJT0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rcl1Q9JJT0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rcl1Q9JJT0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.37■□□□□ 0.37
Rcl1Q9JJT0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rcl1Q9JJT0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rcl1Q9JJT0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rcl1Q9JJT0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rcl1Q9JJT0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rcl1Q9JJT0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rcl1Q9JJT0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rcl1Q9JJT0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rcl1Q9JJT0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rcl1Q9JJT0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rcl1Q9JJT0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rcl1Q9JJT0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Rcl1Q9JJT0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rcl1Q9JJT0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rcl1Q9JJT0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Rcl1Q9JJT0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.33■□□□□ 0.37
Rcl1Q9JJT0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rcl1Q9JJT0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rcl1Q9JJT0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rcl1Q9JJT0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rcl1Q9JJT0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rcl1Q9JJT0 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.33■□□□□ 0.36
Rcl1Q9JJT0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rcl1Q9JJT0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rcl1Q9JJT0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rcl1Q9JJT0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms