Protein–RNA interactions for Protein: Q9JI58

Raet1d, Retinoic acid early-inducible protein 1-delta, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1dQ9JI58 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.27■□□□□ 0.68
Raet1dQ9JI58 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1dQ9JI58 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.27■□□□□ 0.67
Raet1dQ9JI58 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.26■□□□□ 0.67
Raet1dQ9JI58 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Raet1dQ9JI58 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Raet1dQ9JI58 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raet1dQ9JI58 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raet1dQ9JI58 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raet1dQ9JI58 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raet1dQ9JI58 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Raet1dQ9JI58 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Gm15546-201ENSMUST00000122095 826 ntBASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Gm10399-202ENSMUST00000202768 748 ntBASIC19.25■□□□□ 0.67
Raet1dQ9JI58 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Raet1dQ9JI58 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Raet1dQ9JI58 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1dQ9JI58 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1dQ9JI58 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1dQ9JI58 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1dQ9JI58 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Raet1dQ9JI58 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Raet1dQ9JI58 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1dQ9JI58 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1dQ9JI58 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1dQ9JI58 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1dQ9JI58 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1dQ9JI58 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Raet1dQ9JI58 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Raet1dQ9JI58 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raet1dQ9JI58 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Raet1dQ9JI58 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raet1dQ9JI58 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.21■□□□□ 0.67
Raet1dQ9JI58 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.21■□□□□ 0.67
Raet1dQ9JI58 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raet1dQ9JI58 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Raet1dQ9JI58 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Raet1dQ9JI58 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Raet1dQ9JI58 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1dQ9JI58 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1dQ9JI58 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Raet1dQ9JI58 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1dQ9JI58 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1dQ9JI58 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.2■□□□□ 0.66
Raet1dQ9JI58 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1dQ9JI58 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Raet1dQ9JI58 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.19■□□□□ 0.66
Raet1dQ9JI58 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Raet1dQ9JI58 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raet1dQ9JI58 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Raet1dQ9JI58 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Raet1dQ9JI58 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms