Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim39Q9ESN2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim39Q9ESN2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim39Q9ESN2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim39Q9ESN2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim39Q9ESN2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim39Q9ESN2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim39Q9ESN2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim39Q9ESN2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim39Q9ESN2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim39Q9ESN2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim39Q9ESN2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim39Q9ESN2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim39Q9ESN2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Trim39Q9ESN2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.2■□□□□ 0.66
Trim39Q9ESN2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim39Q9ESN2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim39Q9ESN2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.2■□□□□ 0.66
Trim39Q9ESN2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim39Q9ESN2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.2■□□□□ 0.66
Trim39Q9ESN2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim39Q9ESN2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim39Q9ESN2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim39Q9ESN2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.19■□□□□ 0.66
Trim39Q9ESN2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim39Q9ESN2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim39Q9ESN2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim39Q9ESN2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim39Q9ESN2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim39Q9ESN2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim39Q9ESN2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim39Q9ESN2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim39Q9ESN2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim39Q9ESN2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim39Q9ESN2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim39Q9ESN2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim39Q9ESN2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim39Q9ESN2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim39Q9ESN2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim39Q9ESN2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim39Q9ESN2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim39Q9ESN2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim39Q9ESN2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim39Q9ESN2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim39Q9ESN2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim39Q9ESN2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim39Q9ESN2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim39Q9ESN2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim39Q9ESN2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim39Q9ESN2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim39Q9ESN2 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.15■□□□□ 0.66
Trim39Q9ESN2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim39Q9ESN2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim39Q9ESN2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim39Q9ESN2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim39Q9ESN2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim39Q9ESN2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trim39Q9ESN2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim39Q9ESN2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim39Q9ESN2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim39Q9ESN2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim39Q9ESN2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim39Q9ESN2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim39Q9ESN2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim39Q9ESN2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim39Q9ESN2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim39Q9ESN2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim39Q9ESN2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim39Q9ESN2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim39Q9ESN2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms