Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tubb3Q9ERD7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tubb3Q9ERD7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb3Q9ERD7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb3Q9ERD7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb3Q9ERD7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb3Q9ERD7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Tubb3Q9ERD7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb3Q9ERD7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb3Q9ERD7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubb3Q9ERD7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubb3Q9ERD7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubb3Q9ERD7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubb3Q9ERD7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.6■□□□□ 0.89
Tubb3Q9ERD7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb3Q9ERD7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb3Q9ERD7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb3Q9ERD7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb3Q9ERD7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb3Q9ERD7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.59■□□□□ 0.89
Tubb3Q9ERD7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.59■□□□□ 0.89
Tubb3Q9ERD7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tubb3Q9ERD7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb3Q9ERD7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tubb3Q9ERD7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tubb3Q9ERD7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tubb3Q9ERD7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.58■□□□□ 0.89
Tubb3Q9ERD7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubb3Q9ERD7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tubb3Q9ERD7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb3Q9ERD7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb3Q9ERD7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.57■□□□□ 0.88
Tubb3Q9ERD7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb3Q9ERD7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb3Q9ERD7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb3Q9ERD7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb3Q9ERD7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb3Q9ERD7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb3Q9ERD7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb3Q9ERD7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.56■□□□□ 0.88
Tubb3Q9ERD7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb3Q9ERD7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb3Q9ERD7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb3Q9ERD7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb3Q9ERD7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb3Q9ERD7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubb3Q9ERD7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubb3Q9ERD7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb3Q9ERD7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb3Q9ERD7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.54■□□□□ 0.88
Tubb3Q9ERD7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tubb3Q9ERD7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tubb3Q9ERD7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.54■□□□□ 0.88
Tubb3Q9ERD7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tubb3Q9ERD7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubb3Q9ERD7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubb3Q9ERD7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Tubb3Q9ERD7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb3Q9ERD7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb3Q9ERD7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.52■□□□□ 0.88
Tubb3Q9ERD7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.52■□□□□ 0.88
Tubb3Q9ERD7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubb3Q9ERD7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
Tubb3Q9ERD7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb3Q9ERD7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb3Q9ERD7 Gm14117-201ENSMUST00000122417 843 ntBASIC20.51■□□□□ 0.87
Tubb3Q9ERD7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb3Q9ERD7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb3Q9ERD7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb3Q9ERD7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb3Q9ERD7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubb3Q9ERD7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tubb3Q9ERD7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tubb3Q9ERD7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tubb3Q9ERD7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tubb3Q9ERD7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Tubb3Q9ERD7 Gm9959-201ENSMUST00000068277 390 ntBASIC20.5■□□□□ 0.87
Tubb3Q9ERD7 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms