Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps35Q9EQH3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps35Q9EQH3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps35Q9EQH3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.73■□□□□ 0.91
Vps35Q9EQH3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps35Q9EQH3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps35Q9EQH3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps35Q9EQH3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps35Q9EQH3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Vps35Q9EQH3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Vps35Q9EQH3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps35Q9EQH3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps35Q9EQH3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps35Q9EQH3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps35Q9EQH3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps35Q9EQH3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Vps35Q9EQH3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps35Q9EQH3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps35Q9EQH3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Vps35Q9EQH3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps35Q9EQH3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps35Q9EQH3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.7■□□□□ 0.9
Vps35Q9EQH3 Gm40881-201ENSMUST00000223397 166 ntBASIC20.7■□□□□ 0.9
Vps35Q9EQH3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Vps35Q9EQH3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Vps35Q9EQH3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Vps35Q9EQH3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps35Q9EQH3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Vps35Q9EQH3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vps35Q9EQH3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps35Q9EQH3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Vps35Q9EQH3 Rps24-207ENSMUST00000224568 714 ntBASIC20.68■□□□□ 0.9
Vps35Q9EQH3 Gm9959-201ENSMUST00000068277 390 ntBASIC20.68■□□□□ 0.9
Vps35Q9EQH3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vps35Q9EQH3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps35Q9EQH3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps35Q9EQH3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vps35Q9EQH3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Vps35Q9EQH3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps35Q9EQH3 Gm45102-201ENSMUST00000207427 857 ntBASIC20.67■□□□□ 0.9
Vps35Q9EQH3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps35Q9EQH3 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.67■□□□□ 0.9
Vps35Q9EQH3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps35Q9EQH3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps35Q9EQH3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps35Q9EQH3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.66■□□□□ 0.9
Vps35Q9EQH3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps35Q9EQH3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps35Q9EQH3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps35Q9EQH3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms