Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nif3l1Q9EQ80 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nif3l1Q9EQ80 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nif3l1Q9EQ80 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.67■□□□□ 0.9
Nif3l1Q9EQ80 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Nif3l1Q9EQ80 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.67■□□□□ 0.9
Nif3l1Q9EQ80 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.66■□□□□ 0.9
Nif3l1Q9EQ80 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nif3l1Q9EQ80 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nif3l1Q9EQ80 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nif3l1Q9EQ80 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nif3l1Q9EQ80 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nif3l1Q9EQ80 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nif3l1Q9EQ80 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.65■□□□□ 0.9
Nif3l1Q9EQ80 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nif3l1Q9EQ80 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nif3l1Q9EQ80 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nif3l1Q9EQ80 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nif3l1Q9EQ80 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nif3l1Q9EQ80 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nif3l1Q9EQ80 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nif3l1Q9EQ80 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nif3l1Q9EQ80 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nif3l1Q9EQ80 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nif3l1Q9EQ80 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nif3l1Q9EQ80 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nif3l1Q9EQ80 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nif3l1Q9EQ80 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nif3l1Q9EQ80 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nif3l1Q9EQ80 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Nif3l1Q9EQ80 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nif3l1Q9EQ80 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Gm40881-201ENSMUST00000223397 166 ntBASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nif3l1Q9EQ80 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.6■□□□□ 0.89
Nif3l1Q9EQ80 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nif3l1Q9EQ80 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nif3l1Q9EQ80 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.58■□□□□ 0.89
Nif3l1Q9EQ80 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nif3l1Q9EQ80 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nif3l1Q9EQ80 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Nif3l1Q9EQ80 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.57■□□□□ 0.88
Nif3l1Q9EQ80 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.57■□□□□ 0.88
Nif3l1Q9EQ80 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nif3l1Q9EQ80 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nif3l1Q9EQ80 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nif3l1Q9EQ80 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nif3l1Q9EQ80 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nif3l1Q9EQ80 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nif3l1Q9EQ80 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.57■□□□□ 0.88
Nif3l1Q9EQ80 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms