Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rrp8Q9DB85 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rrp8Q9DB85 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.43■□□□□ 0.86
Rrp8Q9DB85 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.43■□□□□ 0.86
Rrp8Q9DB85 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rrp8Q9DB85 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rrp8Q9DB85 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rrp8Q9DB85 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rrp8Q9DB85 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Gm8493-201ENSMUST00000196881 489 ntBASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rrp8Q9DB85 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rrp8Q9DB85 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rrp8Q9DB85 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.4■□□□□ 0.86
Rrp8Q9DB85 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rrp8Q9DB85 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.4■□□□□ 0.86
Rrp8Q9DB85 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.4■□□□□ 0.86
Rrp8Q9DB85 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.4■□□□□ 0.86
Rrp8Q9DB85 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rrp8Q9DB85 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rrp8Q9DB85 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Rrp8Q9DB85 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Gm7143-201ENSMUST00000222811 859 ntBASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rrp8Q9DB85 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rrp8Q9DB85 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rrp8Q9DB85 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rrp8Q9DB85 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rrp8Q9DB85 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rrp8Q9DB85 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rrp8Q9DB85 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rrp8Q9DB85 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.34■□□□□ 0.85
Rrp8Q9DB85 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rrp8Q9DB85 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rrp8Q9DB85 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rrp8Q9DB85 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.33■□□□□ 0.84
Rrp8Q9DB85 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Rrp8Q9DB85 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rrp8Q9DB85 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rrp8Q9DB85 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
Rrp8Q9DB85 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rrp8Q9DB85 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.32■□□□□ 0.84
Rrp8Q9DB85 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.32■□□□□ 0.84
Rrp8Q9DB85 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rrp8Q9DB85 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms