Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Cir1Q9DA19 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cir1Q9DA19 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cir1Q9DA19 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cir1Q9DA19 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cir1Q9DA19 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cir1Q9DA19 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cir1Q9DA19 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cir1Q9DA19 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.89■□□□□ 0.45
Cir1Q9DA19 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cir1Q9DA19 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cir1Q9DA19 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.88■□□□□ 0.45
Cir1Q9DA19 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.88■□□□□ 0.45
Cir1Q9DA19 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cir1Q9DA19 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cir1Q9DA19 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cir1Q9DA19 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cir1Q9DA19 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cir1Q9DA19 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cir1Q9DA19 Terc-201ENSMUST00000082862 423 ntBASIC17.87■□□□□ 0.45
Cir1Q9DA19 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cir1Q9DA19 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cir1Q9DA19 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cir1Q9DA19 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cir1Q9DA19 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cir1Q9DA19 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.86■□□□□ 0.45
Cir1Q9DA19 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.86■□□□□ 0.45
Cir1Q9DA19 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cir1Q9DA19 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
Cir1Q9DA19 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cir1Q9DA19 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.85■□□□□ 0.45
Cir1Q9DA19 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cir1Q9DA19 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cir1Q9DA19 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cir1Q9DA19 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cir1Q9DA19 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cir1Q9DA19 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cir1Q9DA19 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cir1Q9DA19 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cir1Q9DA19 Gm15039-201ENSMUST00000118914 875 ntBASIC17.84■□□□□ 0.45
Cir1Q9DA19 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cir1Q9DA19 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cir1Q9DA19 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cir1Q9DA19 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cir1Q9DA19 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cir1Q9DA19 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cir1Q9DA19 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cir1Q9DA19 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cir1Q9DA19 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.83■□□□□ 0.44
Cir1Q9DA19 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cir1Q9DA19 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cir1Q9DA19 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cir1Q9DA19 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cir1Q9DA19 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cir1Q9DA19 Gm22567-201ENSMUST00000175542 342 ntBASIC17.82■□□□□ 0.44
Cir1Q9DA19 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.82■□□□□ 0.44
Cir1Q9DA19 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.82■□□□□ 0.44
Cir1Q9DA19 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.82■□□□□ 0.44
Cir1Q9DA19 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Cir1Q9DA19 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cir1Q9DA19 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cir1Q9DA19 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cir1Q9DA19 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cir1Q9DA19 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cir1Q9DA19 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cir1Q9DA19 Gm15546-201ENSMUST00000122095 826 ntBASIC17.81■□□□□ 0.44
Cir1Q9DA19 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cir1Q9DA19 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.81■□□□□ 0.44
Cir1Q9DA19 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cir1Q9DA19 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cir1Q9DA19 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.81■□□□□ 0.44
Cir1Q9DA19 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cir1Q9DA19 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.8■□□□□ 0.44
Cir1Q9DA19 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cir1Q9DA19 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cir1Q9DA19 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cir1Q9DA19 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cir1Q9DA19 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cir1Q9DA19 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cir1Q9DA19 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.79■□□□□ 0.44
Cir1Q9DA19 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cir1Q9DA19 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cir1Q9DA19 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cir1Q9DA19 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cir1Q9DA19 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cir1Q9DA19 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cir1Q9DA19 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cir1Q9DA19 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Cir1Q9DA19 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cir1Q9DA19 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms