Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sh2d6Q9D413 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2d6Q9D413 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2d6Q9D413 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.26■□□□□ 0.35
Sh2d6Q9D413 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.26■□□□□ 0.35
Sh2d6Q9D413 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2d6Q9D413 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2d6Q9D413 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sh2d6Q9D413 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh2d6Q9D413 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh2d6Q9D413 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d6Q9D413 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sh2d6Q9D413 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d6Q9D413 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d6Q9D413 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d6Q9D413 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.24■□□□□ 0.35
Sh2d6Q9D413 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d6Q9D413 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sh2d6Q9D413 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d6Q9D413 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d6Q9D413 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d6Q9D413 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.23■□□□□ 0.35
Sh2d6Q9D413 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d6Q9D413 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sh2d6Q9D413 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d6Q9D413 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d6Q9D413 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d6Q9D413 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d6Q9D413 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d6Q9D413 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d6Q9D413 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d6Q9D413 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d6Q9D413 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d6Q9D413 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Sh2d6Q9D413 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d6Q9D413 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Sh2d6Q9D413 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d6Q9D413 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.2■□□□□ 0.34
Sh2d6Q9D413 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d6Q9D413 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d6Q9D413 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sh2d6Q9D413 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d6Q9D413 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.2■□□□□ 0.34
Sh2d6Q9D413 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d6Q9D413 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Gm22238-201ENSMUST00000175222 88 ntBASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d6Q9D413 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d6Q9D413 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.17■□□□□ 0.34
Sh2d6Q9D413 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sh2d6Q9D413 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.17■□□□□ 0.34
Sh2d6Q9D413 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.17■□□□□ 0.34
Sh2d6Q9D413 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sh2d6Q9D413 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d6Q9D413 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d6Q9D413 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d6Q9D413 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d6Q9D413 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d6Q9D413 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d6Q9D413 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d6Q9D413 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms