Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.4■□□□□ 0.7
Cthrc1Q9D1D6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cthrc1Q9D1D6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cthrc1Q9D1D6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cthrc1Q9D1D6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cthrc1Q9D1D6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cthrc1Q9D1D6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.39■□□□□ 0.7
Cthrc1Q9D1D6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cthrc1Q9D1D6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cthrc1Q9D1D6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.39■□□□□ 0.69
Cthrc1Q9D1D6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.39■□□□□ 0.69
Cthrc1Q9D1D6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.39■□□□□ 0.69
Cthrc1Q9D1D6 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.39■□□□□ 0.69
Cthrc1Q9D1D6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cthrc1Q9D1D6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cthrc1Q9D1D6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cthrc1Q9D1D6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Cthrc1Q9D1D6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cthrc1Q9D1D6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cthrc1Q9D1D6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cthrc1Q9D1D6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cthrc1Q9D1D6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.37■□□□□ 0.69
Cthrc1Q9D1D6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cthrc1Q9D1D6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cthrc1Q9D1D6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cthrc1Q9D1D6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cthrc1Q9D1D6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cthrc1Q9D1D6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cthrc1Q9D1D6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cthrc1Q9D1D6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cthrc1Q9D1D6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cthrc1Q9D1D6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cthrc1Q9D1D6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cthrc1Q9D1D6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.33■□□□□ 0.69
Cthrc1Q9D1D6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cthrc1Q9D1D6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cthrc1Q9D1D6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.33■□□□□ 0.68
Cthrc1Q9D1D6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cthrc1Q9D1D6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cthrc1Q9D1D6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cthrc1Q9D1D6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cthrc1Q9D1D6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cthrc1Q9D1D6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cthrc1Q9D1D6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cthrc1Q9D1D6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cthrc1Q9D1D6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cthrc1Q9D1D6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cthrc1Q9D1D6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cthrc1Q9D1D6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cthrc1Q9D1D6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cthrc1Q9D1D6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cthrc1Q9D1D6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cthrc1Q9D1D6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cthrc1Q9D1D6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cthrc1Q9D1D6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cthrc1Q9D1D6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Gm40881-201ENSMUST00000223397 166 ntBASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cthrc1Q9D1D6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cthrc1Q9D1D6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cthrc1Q9D1D6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cthrc1Q9D1D6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms