Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raet1eQ9CZQ6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raet1eQ9CZQ6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raet1eQ9CZQ6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1eQ9CZQ6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1eQ9CZQ6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1eQ9CZQ6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1eQ9CZQ6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1eQ9CZQ6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Raet1eQ9CZQ6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.29■□□□□ 0.52
Raet1eQ9CZQ6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.29■□□□□ 0.52
Raet1eQ9CZQ6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Raet1eQ9CZQ6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raet1eQ9CZQ6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Raet1eQ9CZQ6 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.28■□□□□ 0.52
Raet1eQ9CZQ6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raet1eQ9CZQ6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raet1eQ9CZQ6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Raet1eQ9CZQ6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Raet1eQ9CZQ6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Raet1eQ9CZQ6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Raet1eQ9CZQ6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Raet1eQ9CZQ6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Raet1eQ9CZQ6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Raet1eQ9CZQ6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Raet1eQ9CZQ6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Raet1eQ9CZQ6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Raet1eQ9CZQ6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Raet1eQ9CZQ6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Raet1eQ9CZQ6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Raet1eQ9CZQ6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Raet1eQ9CZQ6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Raet1eQ9CZQ6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1eQ9CZQ6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1eQ9CZQ6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Raet1eQ9CZQ6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1eQ9CZQ6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1eQ9CZQ6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Raet1eQ9CZQ6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Raet1eQ9CZQ6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1eQ9CZQ6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1eQ9CZQ6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1eQ9CZQ6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1eQ9CZQ6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Raet1eQ9CZQ6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1eQ9CZQ6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.22■□□□□ 0.51
Raet1eQ9CZQ6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1eQ9CZQ6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Raet1eQ9CZQ6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1eQ9CZQ6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Raet1eQ9CZQ6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Raet1eQ9CZQ6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1eQ9CZQ6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1eQ9CZQ6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Raet1eQ9CZQ6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1eQ9CZQ6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms