Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim13Q9CYB0 Gm6311-201ENSMUST00000073790 878 ntBASIC19.08■□□□□ 0.64
Trim13Q9CYB0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim13Q9CYB0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim13Q9CYB0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim13Q9CYB0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim13Q9CYB0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim13Q9CYB0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.05■□□□□ 0.64
Trim13Q9CYB0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim13Q9CYB0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim13Q9CYB0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim13Q9CYB0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim13Q9CYB0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.05■□□□□ 0.64
Trim13Q9CYB0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim13Q9CYB0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Trim13Q9CYB0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim13Q9CYB0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim13Q9CYB0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim13Q9CYB0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim13Q9CYB0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Trim13Q9CYB0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Trim13Q9CYB0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim13Q9CYB0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim13Q9CYB0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim13Q9CYB0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim13Q9CYB0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim13Q9CYB0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim13Q9CYB0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim13Q9CYB0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim13Q9CYB0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim13Q9CYB0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim13Q9CYB0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19■□□□□ 0.63
Trim13Q9CYB0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim13Q9CYB0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim13Q9CYB0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim13Q9CYB0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim13Q9CYB0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim13Q9CYB0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim13Q9CYB0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim13Q9CYB0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim13Q9CYB0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim13Q9CYB0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms