Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc3Q9CWU5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
Khdc3Q9CWU5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc3Q9CWU5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc3Q9CWU5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Khdc3Q9CWU5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc3Q9CWU5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc3Q9CWU5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc3Q9CWU5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc3Q9CWU5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Khdc3Q9CWU5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc3Q9CWU5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Khdc3Q9CWU5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.89■□□□□ 0.77
Khdc3Q9CWU5 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.89■□□□□ 0.77
Khdc3Q9CWU5 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.88■□□□□ 0.77
Khdc3Q9CWU5 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.88■□□□□ 0.77
Khdc3Q9CWU5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc3Q9CWU5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc3Q9CWU5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc3Q9CWU5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Khdc3Q9CWU5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc3Q9CWU5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Khdc3Q9CWU5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc3Q9CWU5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Khdc3Q9CWU5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc3Q9CWU5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc3Q9CWU5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc3Q9CWU5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Khdc3Q9CWU5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc3Q9CWU5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc3Q9CWU5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc3Q9CWU5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc3Q9CWU5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc3Q9CWU5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc3Q9CWU5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.84■□□□□ 0.77
Khdc3Q9CWU5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Khdc3Q9CWU5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Khdc3Q9CWU5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Khdc3Q9CWU5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.83■□□□□ 0.76
Khdc3Q9CWU5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.83■□□□□ 0.76
Khdc3Q9CWU5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Khdc3Q9CWU5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Khdc3Q9CWU5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Khdc3Q9CWU5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Khdc3Q9CWU5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Khdc3Q9CWU5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc3Q9CWU5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc3Q9CWU5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Khdc3Q9CWU5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Khdc3Q9CWU5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Khdc3Q9CWU5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.8■□□□□ 0.76
Khdc3Q9CWU5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Khdc3Q9CWU5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.8■□□□□ 0.76
Khdc3Q9CWU5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Khdc3Q9CWU5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms