Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrc40Q9CRC8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrc40Q9CRC8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrc40Q9CRC8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrc40Q9CRC8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrc40Q9CRC8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Gm43566-201ENSMUST00000196851 808 ntBASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrc40Q9CRC8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Lrrc40Q9CRC8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.64■□□□□ 0.9
Lrrc40Q9CRC8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Lrrc40Q9CRC8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lrrc40Q9CRC8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lrrc40Q9CRC8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.64■□□□□ 0.89
Lrrc40Q9CRC8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.64■□□□□ 0.89
Lrrc40Q9CRC8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lrrc40Q9CRC8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lrrc40Q9CRC8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lrrc40Q9CRC8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lrrc40Q9CRC8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lrrc40Q9CRC8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Lrrc40Q9CRC8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lrrc40Q9CRC8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lrrc40Q9CRC8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.62■□□□□ 0.89
Lrrc40Q9CRC8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Lrrc40Q9CRC8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lrrc40Q9CRC8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lrrc40Q9CRC8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lrrc40Q9CRC8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.62■□□□□ 0.89
Lrrc40Q9CRC8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lrrc40Q9CRC8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrc40Q9CRC8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Lrrc40Q9CRC8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrc40Q9CRC8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.61■□□□□ 0.89
Lrrc40Q9CRC8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrc40Q9CRC8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrc40Q9CRC8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lrrc40Q9CRC8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Lrrc40Q9CRC8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrc40Q9CRC8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrc40Q9CRC8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrc40Q9CRC8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.6■□□□□ 0.89
Lrrc40Q9CRC8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrc40Q9CRC8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrc40Q9CRC8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrc40Q9CRC8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Lrrc40Q9CRC8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrc40Q9CRC8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrc40Q9CRC8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrc40Q9CRC8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrc40Q9CRC8 Gm13238-201ENSMUST00000117655 780 ntBASIC20.59■□□□□ 0.89
Lrrc40Q9CRC8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
Lrrc40Q9CRC8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.58■□□□□ 0.89
Lrrc40Q9CRC8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrc40Q9CRC8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrc40Q9CRC8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrc40Q9CRC8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lrrc40Q9CRC8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrc40Q9CRC8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lrrc40Q9CRC8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrc40Q9CRC8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrc40Q9CRC8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrrc40Q9CRC8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lrrc40Q9CRC8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrc40Q9CRC8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrc40Q9CRC8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrc40Q9CRC8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrc40Q9CRC8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms