Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Gm9870-201ENSMUST00000063874 645 ntBASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61bQ9CQS8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 Gm45417-201ENSMUST00000209533 758 ntBASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61bQ9CQS8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61bQ9CQS8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61bQ9CQS8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Serp2-204ENSMUST00000228055 705 ntBASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61bQ9CQS8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Gm43759-201ENSMUST00000196925 1261 ntBASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61bQ9CQS8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms