Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chchd1Q9CQA6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chchd1Q9CQA6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chchd1Q9CQA6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chchd1Q9CQA6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Chchd1Q9CQA6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chchd1Q9CQA6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chchd1Q9CQA6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chchd1Q9CQA6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chchd1Q9CQA6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.71■□□□□ 0.11
Chchd1Q9CQA6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chchd1Q9CQA6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chchd1Q9CQA6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chchd1Q9CQA6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chchd1Q9CQA6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chchd1Q9CQA6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.71■□□□□ 0.11
Chchd1Q9CQA6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chchd1Q9CQA6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chchd1Q9CQA6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.71■□□□□ 0.1
Chchd1Q9CQA6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chchd1Q9CQA6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chchd1Q9CQA6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chchd1Q9CQA6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chchd1Q9CQA6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Chchd1Q9CQA6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Chchd1Q9CQA6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Chchd1Q9CQA6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chchd1Q9CQA6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chchd1Q9CQA6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chchd1Q9CQA6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chchd1Q9CQA6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chchd1Q9CQA6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chchd1Q9CQA6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chchd1Q9CQA6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chchd1Q9CQA6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Chchd1Q9CQA6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chchd1Q9CQA6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chchd1Q9CQA6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Chchd1Q9CQA6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chchd1Q9CQA6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chchd1Q9CQA6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chchd1Q9CQA6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chchd1Q9CQA6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chchd1Q9CQA6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Chchd1Q9CQA6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chchd1Q9CQA6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chchd1Q9CQA6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 586.2 ms