Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl54Q9CPW3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Mrpl54Q9CPW3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl54Q9CPW3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl54Q9CPW3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl54Q9CPW3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl54Q9CPW3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl54Q9CPW3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Mrpl54Q9CPW3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl54Q9CPW3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl54Q9CPW3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl54Q9CPW3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Mrpl54Q9CPW3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl54Q9CPW3 Terc-201ENSMUST00000082862 423 ntBASIC18.47■□□□□ 0.55
Mrpl54Q9CPW3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl54Q9CPW3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl54Q9CPW3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Mrpl54Q9CPW3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl54Q9CPW3 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.46■□□□□ 0.55
Mrpl54Q9CPW3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Mrpl54Q9CPW3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.46■□□□□ 0.55
Mrpl54Q9CPW3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl54Q9CPW3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl54Q9CPW3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl54Q9CPW3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl54Q9CPW3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Mrpl54Q9CPW3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mrpl54Q9CPW3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mrpl54Q9CPW3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mrpl54Q9CPW3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mrpl54Q9CPW3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mrpl54Q9CPW3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mrpl54Q9CPW3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mrpl54Q9CPW3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Mrpl54Q9CPW3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Gm45855-201ENSMUST00000212546 880 ntBASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mrpl54Q9CPW3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mrpl54Q9CPW3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mrpl54Q9CPW3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mrpl54Q9CPW3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mrpl54Q9CPW3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mrpl54Q9CPW3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.42■□□□□ 0.54
Mrpl54Q9CPW3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mrpl54Q9CPW3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mrpl54Q9CPW3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mrpl54Q9CPW3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mrpl54Q9CPW3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mrpl54Q9CPW3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl54Q9CPW3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl54Q9CPW3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms