Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim16Q99PP9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim16Q99PP9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim16Q99PP9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim16Q99PP9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim16Q99PP9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim16Q99PP9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim16Q99PP9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim16Q99PP9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim16Q99PP9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim16Q99PP9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim16Q99PP9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trim16Q99PP9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim16Q99PP9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim16Q99PP9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim16Q99PP9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim16Q99PP9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim16Q99PP9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim16Q99PP9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim16Q99PP9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim16Q99PP9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim16Q99PP9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim16Q99PP9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim16Q99PP9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim16Q99PP9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim16Q99PP9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim16Q99PP9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Trim16Q99PP9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim16Q99PP9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trim16Q99PP9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim16Q99PP9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim16Q99PP9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim16Q99PP9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim16Q99PP9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim16Q99PP9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim16Q99PP9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Trim16Q99PP9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim16Q99PP9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim16Q99PP9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim16Q99PP9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
Trim16Q99PP9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim16Q99PP9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trim16Q99PP9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim16Q99PP9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim16Q99PP9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Trim16Q99PP9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim16Q99PP9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim16Q99PP9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim16Q99PP9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim16Q99PP9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim16Q99PP9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim16Q99PP9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim16Q99PP9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim16Q99PP9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.11■□□□□ 0.81
Trim16Q99PP9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim16Q99PP9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim16Q99PP9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim16Q99PP9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim16Q99PP9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim16Q99PP9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim16Q99PP9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim16Q99PP9 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.09■□□□□ 0.81
Trim16Q99PP9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trim16Q99PP9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim16Q99PP9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim16Q99PP9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim16Q99PP9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim16Q99PP9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.09■□□□□ 0.81
Trim16Q99PP9 Gm5812-201ENSMUST00000061073 957 ntBASIC20.09■□□□□ 0.81
Trim16Q99PP9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.09■□□□□ 0.81
Trim16Q99PP9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim16Q99PP9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.08■□□□□ 0.81
Trim16Q99PP9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim16Q99PP9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Trim16Q99PP9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim16Q99PP9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim16Q99PP9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms