Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdh15Q99PJ1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdh15Q99PJ1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdh15Q99PJ1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdh15Q99PJ1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.35■■□□□ 1.49
Pcdh15Q99PJ1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdh15Q99PJ1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdh15Q99PJ1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdh15Q99PJ1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdh15Q99PJ1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdh15Q99PJ1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdh15Q99PJ1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdh15Q99PJ1 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.34■■□□□ 1.49
Pcdh15Q99PJ1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdh15Q99PJ1 Gm10033-202ENSMUST00000211874 928 ntBASIC24.33■■□□□ 1.49
Pcdh15Q99PJ1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pcdh15Q99PJ1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pcdh15Q99PJ1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdh15Q99PJ1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdh15Q99PJ1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC24.33■■□□□ 1.49
Pcdh15Q99PJ1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Pcdh15Q99PJ1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Gm7143-201ENSMUST00000222811 859 ntBASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh15Q99PJ1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Pcdh15Q99PJ1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh15Q99PJ1 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.31■■□□□ 1.48
Pcdh15Q99PJ1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh15Q99PJ1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh15Q99PJ1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh15Q99PJ1 Gm40848-201ENSMUST00000221998 324 ntBASIC24.31■■□□□ 1.48
Pcdh15Q99PJ1 Gm42642-201ENSMUST00000200683 355 ntBASIC24.3■■□□□ 1.48
Pcdh15Q99PJ1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdh15Q99PJ1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdh15Q99PJ1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdh15Q99PJ1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC24.29■■□□□ 1.48
Pcdh15Q99PJ1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdh15Q99PJ1 Gm43060-201ENSMUST00000200621 289 ntBASIC24.29■■□□□ 1.48
Pcdh15Q99PJ1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdh15Q99PJ1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
Pcdh15Q99PJ1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdh15Q99PJ1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdh15Q99PJ1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC24.27■■□□□ 1.48
Pcdh15Q99PJ1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh15Q99PJ1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Pcdh15Q99PJ1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Pcdh15Q99PJ1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh15Q99PJ1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh15Q99PJ1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh15Q99PJ1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh15Q99PJ1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.26■■□□□ 1.47
Pcdh15Q99PJ1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Pcdh15Q99PJ1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
Pcdh15Q99PJ1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdh15Q99PJ1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdh15Q99PJ1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.25■■□□□ 1.47
Pcdh15Q99PJ1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh15Q99PJ1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC24.25■■□□□ 1.47
Pcdh15Q99PJ1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh15Q99PJ1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh15Q99PJ1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh15Q99PJ1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdh15Q99PJ1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdh15Q99PJ1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdh15Q99PJ1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdh15Q99PJ1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh15Q99PJ1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.23■■□□□ 1.47
Pcdh15Q99PJ1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh15Q99PJ1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh15Q99PJ1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Pcdh15Q99PJ1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh15Q99PJ1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh15Q99PJ1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdh15Q99PJ1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.22■■□□□ 1.47
Pcdh15Q99PJ1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.22■■□□□ 1.47
Pcdh15Q99PJ1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Pcdh15Q99PJ1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh15Q99PJ1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.21■■□□□ 1.47
Pcdh15Q99PJ1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh15Q99PJ1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh15Q99PJ1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh15Q99PJ1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh15Q99PJ1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Pcdh15Q99PJ1 Gm43530-201ENSMUST00000195920 274 ntBASIC24.2■■□□□ 1.46
Pcdh15Q99PJ1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdh15Q99PJ1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdh15Q99PJ1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC24.2■■□□□ 1.46
Pcdh15Q99PJ1 Gm12669-201ENSMUST00000122162 1009 ntBASIC24.2■■□□□ 1.46
Pcdh15Q99PJ1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.2■■□□□ 1.46
Pcdh15Q99PJ1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdh15Q99PJ1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Pcdh15Q99PJ1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms