Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcd2Q99JR8 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.22■□□□□ 0.99
Smarcd2Q99JR8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd2Q99JR8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Smarcd2Q99JR8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd2Q99JR8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd2Q99JR8 Gm43017-201ENSMUST00000198296 752 ntBASIC21.2■□□□□ 0.98
Smarcd2Q99JR8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd2Q99JR8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Smarcd2Q99JR8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.2■□□□□ 0.98
Smarcd2Q99JR8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Smarcd2Q99JR8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd2Q99JR8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.19■□□□□ 0.98
Smarcd2Q99JR8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Smarcd2Q99JR8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.19■□□□□ 0.98
Smarcd2Q99JR8 Gm8493-201ENSMUST00000196881 489 ntBASIC21.19■□□□□ 0.98
Smarcd2Q99JR8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd2Q99JR8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd2Q99JR8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd2Q99JR8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcd2Q99JR8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Smarcd2Q99JR8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcd2Q99JR8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcd2Q99JR8 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.18■□□□□ 0.98
Smarcd2Q99JR8 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.18■□□□□ 0.98
Smarcd2Q99JR8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.18■□□□□ 0.98
Smarcd2Q99JR8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd2Q99JR8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd2Q99JR8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd2Q99JR8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd2Q99JR8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd2Q99JR8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd2Q99JR8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd2Q99JR8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd2Q99JR8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Smarcd2Q99JR8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcd2Q99JR8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcd2Q99JR8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcd2Q99JR8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Smarcd2Q99JR8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcd2Q99JR8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcd2Q99JR8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcd2Q99JR8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Smarcd2Q99JR8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.14■□□□□ 0.97
Smarcd2Q99JR8 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.14■□□□□ 0.97
Smarcd2Q99JR8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcd2Q99JR8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcd2Q99JR8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcd2Q99JR8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcd2Q99JR8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcd2Q99JR8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcd2Q99JR8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcd2Q99JR8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcd2Q99JR8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.12■□□□□ 0.97
Smarcd2Q99JR8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcd2Q99JR8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.11■□□□□ 0.97
Smarcd2Q99JR8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcd2Q99JR8 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.11■□□□□ 0.97
Smarcd2Q99JR8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcd2Q99JR8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Smarcd2Q99JR8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcd2Q99JR8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Smarcd2Q99JR8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcd2Q99JR8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcd2Q99JR8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms