Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha1Q91Y21 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Pcdha1Q91Y21 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha1Q91Y21 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha1Q91Y21 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha1Q91Y21 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha1Q91Y21 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha1Q91Y21 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha1Q91Y21 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.73■■□□□ 1.07
Pcdha1Q91Y21 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdha1Q91Y21 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha1Q91Y21 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.72■■□□□ 1.07
Pcdha1Q91Y21 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Pcdha1Q91Y21 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.72■■□□□ 1.07
Pcdha1Q91Y21 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdha1Q91Y21 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Pcdha1Q91Y21 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdha1Q91Y21 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha1Q91Y21 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha1Q91Y21 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdha1Q91Y21 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.71■■□□□ 1.07
Pcdha1Q91Y21 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha1Q91Y21 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha1Q91Y21 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha1Q91Y21 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdha1Q91Y21 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha1Q91Y21 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha1Q91Y21 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha1Q91Y21 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha1Q91Y21 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdha1Q91Y21 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha1Q91Y21 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha1Q91Y21 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha1Q91Y21 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pcdha1Q91Y21 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha1Q91Y21 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Pcdha1Q91Y21 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha1Q91Y21 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha1Q91Y21 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Pcdha1Q91Y21 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha1Q91Y21 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha1Q91Y21 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Pcdha1Q91Y21 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Pcdha1Q91Y21 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdha1Q91Y21 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha1Q91Y21 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha1Q91Y21 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdha1Q91Y21 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcdha1Q91Y21 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha1Q91Y21 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcdha1Q91Y21 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha1Q91Y21 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
Pcdha1Q91Y21 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha1Q91Y21 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha1Q91Y21 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Pcdha1Q91Y21 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.65■■□□□ 1.06
Pcdha1Q91Y21 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdha1Q91Y21 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdha1Q91Y21 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdha1Q91Y21 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha1Q91Y21 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
Pcdha1Q91Y21 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha1Q91Y21 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha1Q91Y21 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha1Q91Y21 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.63■■□□□ 1.05
Pcdha1Q91Y21 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.63■■□□□ 1.05
Pcdha1Q91Y21 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha1Q91Y21 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha1Q91Y21 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha1Q91Y21 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcdha1Q91Y21 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha1Q91Y21 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha1Q91Y21 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha1Q91Y21 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha1Q91Y21 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha1Q91Y21 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha1Q91Y21 Golgb1-201ENSMUST00000023534 498 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms