Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhac1Q91Y10 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdhac1Q91Y10 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhac1Q91Y10 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhac1Q91Y10 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhac1Q91Y10 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhac1Q91Y10 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhac1Q91Y10 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhac1Q91Y10 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdhac1Q91Y10 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhac1Q91Y10 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.33■□□□□ 0.68
Pcdhac1Q91Y10 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhac1Q91Y10 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhac1Q91Y10 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhac1Q91Y10 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhac1Q91Y10 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdhac1Q91Y10 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhac1Q91Y10 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhac1Q91Y10 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhac1Q91Y10 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac1Q91Y10 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac1Q91Y10 Gm5921-201ENSMUST00000075898 882 ntBASIC19.31■□□□□ 0.68
Pcdhac1Q91Y10 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac1Q91Y10 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac1Q91Y10 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhac1Q91Y10 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac1Q91Y10 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhac1Q91Y10 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhac1Q91Y10 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac1Q91Y10 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Pcdhac1Q91Y10 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac1Q91Y10 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhac1Q91Y10 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac1Q91Y10 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac1Q91Y10 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac1Q91Y10 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac1Q91Y10 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac1Q91Y10 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac1Q91Y10 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac1Q91Y10 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhac1Q91Y10 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhac1Q91Y10 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac1Q91Y10 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac1Q91Y10 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac1Q91Y10 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhac1Q91Y10 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdhac1Q91Y10 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhac1Q91Y10 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhac1Q91Y10 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
Pcdhac1Q91Y10 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhac1Q91Y10 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhac1Q91Y10 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.27■□□□□ 0.67
Pcdhac1Q91Y10 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Pcdhac1Q91Y10 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac1Q91Y10 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdhac1Q91Y10 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhac1Q91Y10 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhac1Q91Y10 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.25■□□□□ 0.67
Pcdhac1Q91Y10 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac1Q91Y10 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac1Q91Y10 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhac1Q91Y10 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhac1Q91Y10 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.24■□□□□ 0.67
Pcdhac1Q91Y10 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhac1Q91Y10 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhac1Q91Y10 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms