Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdhb6Q91XZ4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb6Q91XZ4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Gm10399-202ENSMUST00000202768 748 ntBASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb6Q91XZ4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb6Q91XZ4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb6Q91XZ4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Pcdhb6Q91XZ4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb6Q91XZ4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb6Q91XZ4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb6Q91XZ4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb6Q91XZ4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb6Q91XZ4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb6Q91XZ4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb6Q91XZ4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb6Q91XZ4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb6Q91XZ4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.41■■□□□ 1.02
Pcdhb6Q91XZ4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb6Q91XZ4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb6Q91XZ4 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcdhb6Q91XZ4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb6Q91XZ4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb6Q91XZ4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.39■■□□□ 1.01
Pcdhb6Q91XZ4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb6Q91XZ4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb6Q91XZ4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.39■■□□□ 1.01
Pcdhb6Q91XZ4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb6Q91XZ4 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.38■■□□□ 1.01
Pcdhb6Q91XZ4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhb6Q91XZ4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhb6Q91XZ4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb6Q91XZ4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb6Q91XZ4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb6Q91XZ4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb6Q91XZ4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhb6Q91XZ4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb6Q91XZ4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb6Q91XZ4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb6Q91XZ4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
Pcdhb6Q91XZ4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb6Q91XZ4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb6Q91XZ4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhb6Q91XZ4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb6Q91XZ4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhb6Q91XZ4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhb6Q91XZ4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb6Q91XZ4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb6Q91XZ4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb6Q91XZ4 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.35■■□□□ 1.01
Pcdhb6Q91XZ4 Gm5812-201ENSMUST00000061073 957 ntBASIC21.35■■□□□ 1.01
Pcdhb6Q91XZ4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb6Q91XZ4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb6Q91XZ4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb6Q91XZ4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb6Q91XZ4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb6Q91XZ4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb6Q91XZ4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb6Q91XZ4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms