Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb17Q91VD8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb17Q91VD8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb17Q91VD8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb17Q91VD8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb17Q91VD8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb17Q91VD8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb17Q91VD8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb17Q91VD8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb17Q91VD8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb17Q91VD8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Pcdhb17Q91VD8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb17Q91VD8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb17Q91VD8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb17Q91VD8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb17Q91VD8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb17Q91VD8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb17Q91VD8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb17Q91VD8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb17Q91VD8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Pcdhb17Q91VD8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Gm19891-201ENSMUST00000189771 303 ntBASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb17Q91VD8 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb17Q91VD8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Gm22238-201ENSMUST00000175222 88 ntBASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb17Q91VD8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb17Q91VD8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb17Q91VD8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb17Q91VD8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC21.43■■□□□ 1.02
Pcdhb17Q91VD8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb17Q91VD8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdhb17Q91VD8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb17Q91VD8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb17Q91VD8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb17Q91VD8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhb17Q91VD8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb17Q91VD8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms