Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
StrcQ8VIM6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
StrcQ8VIM6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC25.67■■□□□ 1.7
StrcQ8VIM6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC25.67■■□□□ 1.7
StrcQ8VIM6 AC112142.1-201ENSMUST00000228796 918 ntBASIC25.67■■□□□ 1.7
StrcQ8VIM6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
StrcQ8VIM6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
StrcQ8VIM6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
StrcQ8VIM6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
StrcQ8VIM6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
StrcQ8VIM6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
StrcQ8VIM6 Gm6085-201ENSMUST00000182774 1470 ntBASIC25.65■■□□□ 1.7
StrcQ8VIM6 Gm7160-202ENSMUST00000188519 1027 ntBASIC25.65■■□□□ 1.7
StrcQ8VIM6 Gm4430-201ENSMUST00000192413 1943 ntBASIC25.65■■□□□ 1.7
StrcQ8VIM6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
StrcQ8VIM6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
StrcQ8VIM6 Gm40848-201ENSMUST00000221998 324 ntBASIC25.65■■□□□ 1.7
StrcQ8VIM6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
StrcQ8VIM6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
StrcQ8VIM6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
StrcQ8VIM6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
StrcQ8VIM6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
StrcQ8VIM6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
StrcQ8VIM6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
StrcQ8VIM6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
StrcQ8VIM6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
StrcQ8VIM6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
StrcQ8VIM6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
StrcQ8VIM6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
StrcQ8VIM6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
StrcQ8VIM6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
StrcQ8VIM6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
StrcQ8VIM6 Gm10033-202ENSMUST00000211874 928 ntBASIC25.62■■□□□ 1.69
StrcQ8VIM6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
StrcQ8VIM6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
StrcQ8VIM6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
StrcQ8VIM6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
StrcQ8VIM6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
StrcQ8VIM6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
StrcQ8VIM6 Gm7143-201ENSMUST00000222811 859 ntBASIC25.61■■□□□ 1.69
StrcQ8VIM6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
StrcQ8VIM6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC25.6■■□□□ 1.69
StrcQ8VIM6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC25.6■■□□□ 1.69
StrcQ8VIM6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
StrcQ8VIM6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
StrcQ8VIM6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
StrcQ8VIM6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
StrcQ8VIM6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
StrcQ8VIM6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
StrcQ8VIM6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC25.58■■□□□ 1.69
StrcQ8VIM6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
StrcQ8VIM6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
StrcQ8VIM6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.58■■□□□ 1.69
StrcQ8VIM6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC25.58■■□□□ 1.68
StrcQ8VIM6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
StrcQ8VIM6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
StrcQ8VIM6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
StrcQ8VIM6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
StrcQ8VIM6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
StrcQ8VIM6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
StrcQ8VIM6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
StrcQ8VIM6 Gm43060-201ENSMUST00000200621 289 ntBASIC25.56■■□□□ 1.68
StrcQ8VIM6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
StrcQ8VIM6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
StrcQ8VIM6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
StrcQ8VIM6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
StrcQ8VIM6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
StrcQ8VIM6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
StrcQ8VIM6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
StrcQ8VIM6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
StrcQ8VIM6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
StrcQ8VIM6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
StrcQ8VIM6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
StrcQ8VIM6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
StrcQ8VIM6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC25.53■■□□□ 1.68
StrcQ8VIM6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC25.53■■□□□ 1.68
StrcQ8VIM6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC25.53■■□□□ 1.68
StrcQ8VIM6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
StrcQ8VIM6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
StrcQ8VIM6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
StrcQ8VIM6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
StrcQ8VIM6 Gm43530-201ENSMUST00000195920 274 ntBASIC25.53■■□□□ 1.68
StrcQ8VIM6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
StrcQ8VIM6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
StrcQ8VIM6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
StrcQ8VIM6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
StrcQ8VIM6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
StrcQ8VIM6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC25.51■■□□□ 1.67
StrcQ8VIM6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC25.51■■□□□ 1.67
StrcQ8VIM6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
StrcQ8VIM6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC25.51■■□□□ 1.67
StrcQ8VIM6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
StrcQ8VIM6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
StrcQ8VIM6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
StrcQ8VIM6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
StrcQ8VIM6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
StrcQ8VIM6 Gm42642-201ENSMUST00000200683 355 ntBASIC25.49■■□□□ 1.67
StrcQ8VIM6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC25.49■■□□□ 1.67
StrcQ8VIM6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC25.49■■□□□ 1.67
StrcQ8VIM6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms