Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cspg4Q8VHY0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.12■□□□□ 0.49
Cspg4Q8VHY0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cspg4Q8VHY0 Nespas-201ENSMUST00000143738 1083 ntBASIC18.12■□□□□ 0.49
Cspg4Q8VHY0 Gm9870-201ENSMUST00000063874 645 ntBASIC18.12■□□□□ 0.49
Cspg4Q8VHY0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cspg4Q8VHY0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Cspg4Q8VHY0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cspg4Q8VHY0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cspg4Q8VHY0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cspg4Q8VHY0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cspg4Q8VHY0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cspg4Q8VHY0 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.1■□□□□ 0.49
Cspg4Q8VHY0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Cspg4Q8VHY0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.1■□□□□ 0.49
Cspg4Q8VHY0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cspg4Q8VHY0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cspg4Q8VHY0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cspg4Q8VHY0 Mir7071-201ENSMUST00000184847 69 ntBASIC18.09■□□□□ 0.49
Cspg4Q8VHY0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.09■□□□□ 0.49
Cspg4Q8VHY0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cspg4Q8VHY0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cspg4Q8VHY0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cspg4Q8VHY0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cspg4Q8VHY0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cspg4Q8VHY0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cspg4Q8VHY0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.08■□□□□ 0.48
Cspg4Q8VHY0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.08■□□□□ 0.48
Cspg4Q8VHY0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.08■□□□□ 0.48
Cspg4Q8VHY0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cspg4Q8VHY0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cspg4Q8VHY0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Gm27801-201ENSMUST00000184174 223 ntBASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cspg4Q8VHY0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cspg4Q8VHY0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cspg4Q8VHY0 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.05■□□□□ 0.48
Cspg4Q8VHY0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cspg4Q8VHY0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cspg4Q8VHY0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cspg4Q8VHY0 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.04■□□□□ 0.48
Cspg4Q8VHY0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cspg4Q8VHY0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cspg4Q8VHY0 Gm7977-201ENSMUST00000193787 748 ntBASIC18.04■□□□□ 0.48
Cspg4Q8VHY0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 Gm12933-201ENSMUST00000120203 872 ntBASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cspg4Q8VHY0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Cspg4Q8VHY0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cspg4Q8VHY0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cspg4Q8VHY0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cspg4Q8VHY0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Cspg4Q8VHY0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cspg4Q8VHY0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cspg4Q8VHY0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cspg4Q8VHY0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.01■□□□□ 0.47
Cspg4Q8VHY0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cspg4Q8VHY0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.01■□□□□ 0.47
Cspg4Q8VHY0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cspg4Q8VHY0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cspg4Q8VHY0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.01■□□□□ 0.47
Cspg4Q8VHY0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cspg4Q8VHY0 AV356131-201ENSMUST00000206201 750 ntBASIC18.01■□□□□ 0.47
Cspg4Q8VHY0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cspg4Q8VHY0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg4Q8VHY0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms