Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdhr1Q8VHP6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdhr1Q8VHP6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdhr1Q8VHP6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdhr1Q8VHP6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Cdhr1Q8VHP6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdhr1Q8VHP6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.29■□□□□ 0.84
Cdhr1Q8VHP6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdhr1Q8VHP6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdhr1Q8VHP6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdhr1Q8VHP6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdhr1Q8VHP6 Gm9870-201ENSMUST00000063874 645 ntBASIC20.29■□□□□ 0.84
Cdhr1Q8VHP6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdhr1Q8VHP6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdhr1Q8VHP6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr1Q8VHP6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdhr1Q8VHP6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.27■□□□□ 0.84
Cdhr1Q8VHP6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdhr1Q8VHP6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdhr1Q8VHP6 Gm45417-201ENSMUST00000209533 758 ntBASIC20.27■□□□□ 0.84
Cdhr1Q8VHP6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdhr1Q8VHP6 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.27■□□□□ 0.84
Cdhr1Q8VHP6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Cdhr1Q8VHP6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr1Q8VHP6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdhr1Q8VHP6 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.25■□□□□ 0.83
Cdhr1Q8VHP6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.25■□□□□ 0.83
Cdhr1Q8VHP6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdhr1Q8VHP6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdhr1Q8VHP6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Cdhr1Q8VHP6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.25■□□□□ 0.83
Cdhr1Q8VHP6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.24■□□□□ 0.83
Cdhr1Q8VHP6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdhr1Q8VHP6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdhr1Q8VHP6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.24■□□□□ 0.83
Cdhr1Q8VHP6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdhr1Q8VHP6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdhr1Q8VHP6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdhr1Q8VHP6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdhr1Q8VHP6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.23■□□□□ 0.83
Cdhr1Q8VHP6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdhr1Q8VHP6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdhr1Q8VHP6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdhr1Q8VHP6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdhr1Q8VHP6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdhr1Q8VHP6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr1Q8VHP6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cdhr1Q8VHP6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Cdhr1Q8VHP6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdhr1Q8VHP6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.21■□□□□ 0.83
Cdhr1Q8VHP6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Cdhr1Q8VHP6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdhr1Q8VHP6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Cdhr1Q8VHP6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.2■□□□□ 0.82
Cdhr1Q8VHP6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr1Q8VHP6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr1Q8VHP6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr1Q8VHP6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Cdhr1Q8VHP6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr1Q8VHP6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr1Q8VHP6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr1Q8VHP6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdhr1Q8VHP6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdhr1Q8VHP6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.19■□□□□ 0.82
Cdhr1Q8VHP6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cdhr1Q8VHP6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Cdhr1Q8VHP6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdhr1Q8VHP6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdhr1Q8VHP6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdhr1Q8VHP6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cdhr1Q8VHP6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdhr1Q8VHP6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms