Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a20aQ8VDB9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.52■□□□□ 0.88
Slc6a20aQ8VDB9 Gm43566-201ENSMUST00000196851 808 ntBASIC20.52■□□□□ 0.88
Slc6a20aQ8VDB9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a20aQ8VDB9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Slc6a20aQ8VDB9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a20aQ8VDB9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Slc6a20aQ8VDB9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc6a20aQ8VDB9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc6a20aQ8VDB9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a20aQ8VDB9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc6a20aQ8VDB9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc6a20aQ8VDB9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Slc6a20aQ8VDB9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.5■□□□□ 0.87
Slc6a20aQ8VDB9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20aQ8VDB9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20aQ8VDB9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20aQ8VDB9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a20aQ8VDB9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a20aQ8VDB9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a20aQ8VDB9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a20aQ8VDB9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Slc6a20aQ8VDB9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slc6a20aQ8VDB9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a20aQ8VDB9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a20aQ8VDB9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a20aQ8VDB9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a20aQ8VDB9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Slc6a20aQ8VDB9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a20aQ8VDB9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a20aQ8VDB9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a20aQ8VDB9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a20aQ8VDB9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a20aQ8VDB9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a20aQ8VDB9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a20aQ8VDB9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a20aQ8VDB9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.42■□□□□ 0.86
Slc6a20aQ8VDB9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a20aQ8VDB9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a20aQ8VDB9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms