Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sgms1Q8VCQ6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.57■■□□□ 1.2
Sgms1Q8VCQ6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sgms1Q8VCQ6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sgms1Q8VCQ6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sgms1Q8VCQ6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sgms1Q8VCQ6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sgms1Q8VCQ6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sgms1Q8VCQ6 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.56■■□□□ 1.2
Sgms1Q8VCQ6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.56■■□□□ 1.2
Sgms1Q8VCQ6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sgms1Q8VCQ6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sgms1Q8VCQ6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.55■■□□□ 1.2
Sgms1Q8VCQ6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.55■■□□□ 1.2
Sgms1Q8VCQ6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sgms1Q8VCQ6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Sgms1Q8VCQ6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sgms1Q8VCQ6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sgms1Q8VCQ6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sgms1Q8VCQ6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sgms1Q8VCQ6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sgms1Q8VCQ6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sgms1Q8VCQ6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sgms1Q8VCQ6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sgms1Q8VCQ6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sgms1Q8VCQ6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.53■■□□□ 1.2
Sgms1Q8VCQ6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sgms1Q8VCQ6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgms1Q8VCQ6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgms1Q8VCQ6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgms1Q8VCQ6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgms1Q8VCQ6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgms1Q8VCQ6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Sgms1Q8VCQ6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgms1Q8VCQ6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sgms1Q8VCQ6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.52■■□□□ 1.2
Sgms1Q8VCQ6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Sgms1Q8VCQ6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sgms1Q8VCQ6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Sgms1Q8VCQ6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.51■■□□□ 1.19
Sgms1Q8VCQ6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sgms1Q8VCQ6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.5■■□□□ 1.19
Sgms1Q8VCQ6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgms1Q8VCQ6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgms1Q8VCQ6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgms1Q8VCQ6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgms1Q8VCQ6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgms1Q8VCQ6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgms1Q8VCQ6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sgms1Q8VCQ6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sgms1Q8VCQ6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sgms1Q8VCQ6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Sgms1Q8VCQ6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sgms1Q8VCQ6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sgms1Q8VCQ6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.48■■□□□ 1.19
Sgms1Q8VCQ6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sgms1Q8VCQ6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sgms1Q8VCQ6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.47■■□□□ 1.19
Sgms1Q8VCQ6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sgms1Q8VCQ6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.47■■□□□ 1.19
Sgms1Q8VCQ6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sgms1Q8VCQ6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sgms1Q8VCQ6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sgms1Q8VCQ6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sgms1Q8VCQ6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sgms1Q8VCQ6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sgms1Q8VCQ6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sgms1Q8VCQ6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Sgms1Q8VCQ6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sgms1Q8VCQ6 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.46■■□□□ 1.19
Sgms1Q8VCQ6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sgms1Q8VCQ6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sgms1Q8VCQ6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sgms1Q8VCQ6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Sgms1Q8VCQ6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sgms1Q8VCQ6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.45■■□□□ 1.18
Sgms1Q8VCQ6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sgms1Q8VCQ6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Sgms1Q8VCQ6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sgms1Q8VCQ6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sgms1Q8VCQ6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.44■■□□□ 1.18
Sgms1Q8VCQ6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sgms1Q8VCQ6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sgms1Q8VCQ6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sgms1Q8VCQ6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sgms1Q8VCQ6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sgms1Q8VCQ6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sgms1Q8VCQ6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sgms1Q8VCQ6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.42■■□□□ 1.18
Sgms1Q8VCQ6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.42■■□□□ 1.18
Sgms1Q8VCQ6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms