Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brd8Q8R3B7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brd8Q8R3B7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brd8Q8R3B7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brd8Q8R3B7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.23■□□□□ 0.99
Brd8Q8R3B7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brd8Q8R3B7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brd8Q8R3B7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
Brd8Q8R3B7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Brd8Q8R3B7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Brd8Q8R3B7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Brd8Q8R3B7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brd8Q8R3B7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Brd8Q8R3B7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brd8Q8R3B7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.21■□□□□ 0.99
Brd8Q8R3B7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Brd8Q8R3B7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Brd8Q8R3B7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brd8Q8R3B7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Brd8Q8R3B7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brd8Q8R3B7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brd8Q8R3B7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brd8Q8R3B7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brd8Q8R3B7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.19■□□□□ 0.98
Brd8Q8R3B7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brd8Q8R3B7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brd8Q8R3B7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Brd8Q8R3B7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Brd8Q8R3B7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.17■□□□□ 0.98
Brd8Q8R3B7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Brd8Q8R3B7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Brd8Q8R3B7 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.17■□□□□ 0.98
Brd8Q8R3B7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Brd8Q8R3B7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Brd8Q8R3B7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Brd8Q8R3B7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Brd8Q8R3B7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Brd8Q8R3B7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Brd8Q8R3B7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Brd8Q8R3B7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.16■□□□□ 0.98
Brd8Q8R3B7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brd8Q8R3B7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brd8Q8R3B7 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.15■□□□□ 0.98
Brd8Q8R3B7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brd8Q8R3B7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.15■□□□□ 0.98
Brd8Q8R3B7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.15■□□□□ 0.98
Brd8Q8R3B7 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.14■□□□□ 0.98
Brd8Q8R3B7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Brd8Q8R3B7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Brd8Q8R3B7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.14■□□□□ 0.97
Brd8Q8R3B7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Brd8Q8R3B7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Brd8Q8R3B7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.13■□□□□ 0.97
Brd8Q8R3B7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brd8Q8R3B7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.11■□□□□ 0.97
Brd8Q8R3B7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Brd8Q8R3B7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms