Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim31Q8R0K2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim31Q8R0K2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim31Q8R0K2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim31Q8R0K2 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.19■□□□□ 0.82
Trim31Q8R0K2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim31Q8R0K2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim31Q8R0K2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim31Q8R0K2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim31Q8R0K2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim31Q8R0K2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim31Q8R0K2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim31Q8R0K2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim31Q8R0K2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim31Q8R0K2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim31Q8R0K2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim31Q8R0K2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Trim31Q8R0K2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim31Q8R0K2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim31Q8R0K2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim31Q8R0K2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim31Q8R0K2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim31Q8R0K2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim31Q8R0K2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.16■□□□□ 0.82
Trim31Q8R0K2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Trim31Q8R0K2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim31Q8R0K2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trim31Q8R0K2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim31Q8R0K2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trim31Q8R0K2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim31Q8R0K2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim31Q8R0K2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim31Q8R0K2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Trim31Q8R0K2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim31Q8R0K2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim31Q8R0K2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim31Q8R0K2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim31Q8R0K2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim31Q8R0K2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim31Q8R0K2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim31Q8R0K2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Trim31Q8R0K2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
Trim31Q8R0K2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim31Q8R0K2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Trim31Q8R0K2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim31Q8R0K2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.14■□□□□ 0.81
Trim31Q8R0K2 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.14■□□□□ 0.81
Trim31Q8R0K2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trim31Q8R0K2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim31Q8R0K2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim31Q8R0K2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim31Q8R0K2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim31Q8R0K2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim31Q8R0K2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim31Q8R0K2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim31Q8R0K2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Trim31Q8R0K2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.13■□□□□ 0.81
Trim31Q8R0K2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim31Q8R0K2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim31Q8R0K2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim31Q8R0K2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Rps24-207ENSMUST00000224568 714 ntBASIC20.12■□□□□ 0.81
Trim31Q8R0K2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim31Q8R0K2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim31Q8R0K2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim31Q8R0K2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.11■□□□□ 0.81
Trim31Q8R0K2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim31Q8R0K2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim31Q8R0K2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim31Q8R0K2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim31Q8R0K2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim31Q8R0K2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim31Q8R0K2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim31Q8R0K2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim31Q8R0K2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim31Q8R0K2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim31Q8R0K2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim31Q8R0K2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim31Q8R0K2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.08■□□□□ 0.81
Trim31Q8R0K2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim31Q8R0K2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim31Q8R0K2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms