Protein–RNA interactions for Protein: Q8K442

Abca8a, ATP-binding cassette sub-family A member 8-A, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8aQ8K442 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Abca8aQ8K442 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Abca8aQ8K442 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Abca8aQ8K442 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Abca8aQ8K442 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Abca8aQ8K442 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Abca8aQ8K442 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Abca8aQ8K442 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Abca8aQ8K442 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Abca8aQ8K442 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Abca8aQ8K442 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Abca8aQ8K442 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC29.54■■■□□ 2.32
Abca8aQ8K442 Il17rd-202ENSMUST00000223942 2186 ntBASIC29.54■■■□□ 2.32
Abca8aQ8K442 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Abca8aQ8K442 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
Abca8aQ8K442 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Abca8aQ8K442 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC29.53■■■□□ 2.32
Abca8aQ8K442 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Abca8aQ8K442 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC29.53■■■□□ 2.32
Abca8aQ8K442 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Abca8aQ8K442 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Abca8aQ8K442 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Abca8aQ8K442 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC29.51■■■□□ 2.31
Abca8aQ8K442 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC29.51■■■□□ 2.31
Abca8aQ8K442 Mir7075-201ENSMUST00000184187 82 ntBASIC29.51■■■□□ 2.31
Abca8aQ8K442 Gm21168-201ENSMUST00000199646 1096 ntBASIC29.51■■■□□ 2.31
Abca8aQ8K442 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Abca8aQ8K442 Flvcr1-202ENSMUST00000191946 1216 ntBASIC29.5■■■□□ 2.31
Abca8aQ8K442 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Abca8aQ8K442 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Abca8aQ8K442 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Gm8495-201ENSMUST00000188740 694 ntBASIC29.49■■■□□ 2.31
Abca8aQ8K442 Gm43759-201ENSMUST00000196925 1261 ntBASIC29.49■■■□□ 2.31
Abca8aQ8K442 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
Abca8aQ8K442 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Abca8aQ8K442 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Abca8aQ8K442 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Abca8aQ8K442 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Abca8aQ8K442 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Abca8aQ8K442 Gm43530-201ENSMUST00000195920 274 ntBASIC29.48■■■□□ 2.31
Abca8aQ8K442 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC29.48■■■□□ 2.31
Abca8aQ8K442 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Abca8aQ8K442 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Abca8aQ8K442 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC29.47■■■□□ 2.31
Abca8aQ8K442 AC153962.1-201ENSMUST00000218530 1948 ntBASIC29.47■■■□□ 2.31
Abca8aQ8K442 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Abca8aQ8K442 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
Abca8aQ8K442 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Abca8aQ8K442 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC29.46■■■□□ 2.31
Abca8aQ8K442 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Abca8aQ8K442 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Abca8aQ8K442 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Abca8aQ8K442 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC29.45■■■□□ 2.31
Abca8aQ8K442 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
Abca8aQ8K442 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
Abca8aQ8K442 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Abca8aQ8K442 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Abca8aQ8K442 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Abca8aQ8K442 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Abca8aQ8K442 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Abca8aQ8K442 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Abca8aQ8K442 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Abca8aQ8K442 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Abca8aQ8K442 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Abca8aQ8K442 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
Abca8aQ8K442 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC29.43■■■□□ 2.3
Abca8aQ8K442 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Abca8aQ8K442 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Abca8aQ8K442 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Abca8aQ8K442 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Abca8aQ8K442 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Abca8aQ8K442 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Abca8aQ8K442 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Abca8aQ8K442 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Abca8aQ8K442 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Abca8aQ8K442 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Abca8aQ8K442 Wdr70-203ENSMUST00000227371 1130 ntBASIC29.42■■■□□ 2.3
Abca8aQ8K442 Gm5576-201ENSMUST00000075809 1236 ntBASIC29.42■■■□□ 2.3
Abca8aQ8K442 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC29.41■■■□□ 2.3
Abca8aQ8K442 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
Abca8aQ8K442 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Abca8aQ8K442 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC29.41■■■□□ 2.3
Abca8aQ8K442 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC29.41■■■□□ 2.3
Abca8aQ8K442 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Abca8aQ8K442 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC29.41■■■□□ 2.3
Abca8aQ8K442 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Abca8aQ8K442 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Abca8aQ8K442 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC29.4■■■□□ 2.3
Abca8aQ8K442 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Abca8aQ8K442 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC29.4■■■□□ 2.3
Abca8aQ8K442 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Abca8aQ8K442 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms