Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cystm1Q8K353 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cystm1Q8K353 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cystm1Q8K353 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Hsf1-204ENSMUST00000226872 2104 ntBASIC12.91□□□□□ -0.34
Cystm1Q8K353 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Rarb-207ENSMUST00000225921 2756 ntBASIC12.91□□□□□ -0.34
Cystm1Q8K353 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Gm16437-201ENSMUST00000025669 507 ntBASIC12.91□□□□□ -0.34
Cystm1Q8K353 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cystm1Q8K353 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cystm1Q8K353 AC124392.1-201ENSMUST00000225172 5324 ntBASIC12.9□□□□□ -0.34
Cystm1Q8K353 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cystm1Q8K353 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cystm1Q8K353 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cystm1Q8K353 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cystm1Q8K353 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cystm1Q8K353 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cystm1Q8K353 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cystm1Q8K353 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cystm1Q8K353 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.89□□□□□ -0.35
Cystm1Q8K353 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.89□□□□□ -0.35
Cystm1Q8K353 Gm12366-201ENSMUST00000121722 873 ntBASIC12.89□□□□□ -0.35
Cystm1Q8K353 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC12.89□□□□□ -0.35
Cystm1Q8K353 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.89□□□□□ -0.35
Cystm1Q8K353 Gm5786-201ENSMUST00000085368 882 ntBASIC12.89□□□□□ -0.35
Cystm1Q8K353 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cystm1Q8K353 Gm14121-201ENSMUST00000121441 1380 ntBASIC12.89□□□□□ -0.35
Cystm1Q8K353 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cystm1Q8K353 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC12.89□□□□□ -0.35
Cystm1Q8K353 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cystm1Q8K353 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cystm1Q8K353 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Gm42418-201ENSMUST00000182010 1831 ntBASIC12.88□□□□□ -0.35
Cystm1Q8K353 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cystm1Q8K353 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms