Protein–RNA interactions for Protein: Q8K194

Snrnp27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp27Q8K194 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp27Q8K194 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp27Q8K194 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp27Q8K194 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.36■□□□□ 0.85
Snrnp27Q8K194 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp27Q8K194 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp27Q8K194 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp27Q8K194 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp27Q8K194 Gm21956-201ENSMUST00000179946 522 ntBASIC20.35■□□□□ 0.85
Snrnp27Q8K194 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.35■□□□□ 0.85
Snrnp27Q8K194 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.35■□□□□ 0.85
Snrnp27Q8K194 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp27Q8K194 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp27Q8K194 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp27Q8K194 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.34■□□□□ 0.85
Snrnp27Q8K194 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Snrnp27Q8K194 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp27Q8K194 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp27Q8K194 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp27Q8K194 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp27Q8K194 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp27Q8K194 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.33■□□□□ 0.85
Snrnp27Q8K194 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp27Q8K194 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.33■□□□□ 0.85
Snrnp27Q8K194 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snrnp27Q8K194 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.33■□□□□ 0.84
Snrnp27Q8K194 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp27Q8K194 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp27Q8K194 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp27Q8K194 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Snrnp27Q8K194 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Snrnp27Q8K194 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp27Q8K194 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp27Q8K194 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp27Q8K194 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp27Q8K194 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp27Q8K194 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Snrnp27Q8K194 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snrnp27Q8K194 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snrnp27Q8K194 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snrnp27Q8K194 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snrnp27Q8K194 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp27Q8K194 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.29■□□□□ 0.84
Snrnp27Q8K194 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp27Q8K194 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp27Q8K194 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp27Q8K194 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp27Q8K194 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Snrnp27Q8K194 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp27Q8K194 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Snrnp27Q8K194 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Snrnp27Q8K194 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp27Q8K194 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp27Q8K194 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.28■□□□□ 0.84
Snrnp27Q8K194 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Snrnp27Q8K194 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp27Q8K194 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Snrnp27Q8K194 Gm22238-201ENSMUST00000175222 88 ntBASIC20.27■□□□□ 0.84
Snrnp27Q8K194 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.27■□□□□ 0.84
Snrnp27Q8K194 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.27■□□□□ 0.84
Snrnp27Q8K194 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.27■□□□□ 0.84
Snrnp27Q8K194 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.27■□□□□ 0.84
Snrnp27Q8K194 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp27Q8K194 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms