Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rtn1Q8K0T0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Rtn1Q8K0T0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtn1Q8K0T0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Rtn1Q8K0T0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rtn1Q8K0T0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtn1Q8K0T0 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.06■■□□□ 1.44
Rtn1Q8K0T0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rtn1Q8K0T0 Gm40881-201ENSMUST00000223397 166 ntBASIC24.06■■□□□ 1.44
Rtn1Q8K0T0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rtn1Q8K0T0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rtn1Q8K0T0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rtn1Q8K0T0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rtn1Q8K0T0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rtn1Q8K0T0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rtn1Q8K0T0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rtn1Q8K0T0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.05■■□□□ 1.44
Rtn1Q8K0T0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rtn1Q8K0T0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.03■■□□□ 1.44
Rtn1Q8K0T0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rtn1Q8K0T0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rtn1Q8K0T0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.03■■□□□ 1.44
Rtn1Q8K0T0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rtn1Q8K0T0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rtn1Q8K0T0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rtn1Q8K0T0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
Rtn1Q8K0T0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rtn1Q8K0T0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rtn1Q8K0T0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rtn1Q8K0T0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rtn1Q8K0T0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Rtn1Q8K0T0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rtn1Q8K0T0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rtn1Q8K0T0 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rtn1Q8K0T0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Rtn1Q8K0T0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Rtn1Q8K0T0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Rtn1Q8K0T0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Rtn1Q8K0T0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtn1Q8K0T0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtn1Q8K0T0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.99■■□□□ 1.43
Rtn1Q8K0T0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.99■■□□□ 1.43
Rtn1Q8K0T0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rtn1Q8K0T0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtn1Q8K0T0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtn1Q8K0T0 Gm9959-201ENSMUST00000068277 390 ntBASIC23.98■■□□□ 1.43
Rtn1Q8K0T0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtn1Q8K0T0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtn1Q8K0T0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtn1Q8K0T0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.97■■□□□ 1.43
Rtn1Q8K0T0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rtn1Q8K0T0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtn1Q8K0T0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtn1Q8K0T0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.96■■□□□ 1.43
Rtn1Q8K0T0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtn1Q8K0T0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rtn1Q8K0T0 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.95■■□□□ 1.42
Rtn1Q8K0T0 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.95■■□□□ 1.42
Rtn1Q8K0T0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.95■■□□□ 1.42
Rtn1Q8K0T0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Rtn1Q8K0T0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Rtn1Q8K0T0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtn1Q8K0T0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rtn1Q8K0T0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtn1Q8K0T0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtn1Q8K0T0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtn1Q8K0T0 Etf1-202ENSMUST00000180351 108 ntBASIC23.94■■□□□ 1.42
Rtn1Q8K0T0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtn1Q8K0T0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
Rtn1Q8K0T0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rtn1Q8K0T0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtn1Q8K0T0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtn1Q8K0T0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rtn1Q8K0T0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rtn1Q8K0T0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rtn1Q8K0T0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rtn1Q8K0T0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.92■■□□□ 1.42
Rtn1Q8K0T0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.92■■□□□ 1.42
Rtn1Q8K0T0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.92■■□□□ 1.42
Rtn1Q8K0T0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.92■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms