Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.83■■□□□ 1.41
Syne4Q8CII8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.83■■□□□ 1.4
Syne4Q8CII8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Syne4Q8CII8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Syne4Q8CII8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Syne4Q8CII8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.82■■□□□ 1.4
Syne4Q8CII8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Syne4Q8CII8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Syne4Q8CII8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Syne4Q8CII8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Syne4Q8CII8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Syne4Q8CII8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Syne4Q8CII8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.81■■□□□ 1.4
Syne4Q8CII8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Syne4Q8CII8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Syne4Q8CII8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Syne4Q8CII8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Syne4Q8CII8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.8■■□□□ 1.4
Syne4Q8CII8 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.8■■□□□ 1.4
Syne4Q8CII8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Syne4Q8CII8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Syne4Q8CII8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Syne4Q8CII8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Syne4Q8CII8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Syne4Q8CII8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.79■■□□□ 1.4
Syne4Q8CII8 Gm7291-201ENSMUST00000199147 382 ntBASIC23.79■■□□□ 1.4
Syne4Q8CII8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syne4Q8CII8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Syne4Q8CII8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Syne4Q8CII8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Syne4Q8CII8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syne4Q8CII8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Syne4Q8CII8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syne4Q8CII8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.78■■□□□ 1.4
Syne4Q8CII8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syne4Q8CII8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syne4Q8CII8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syne4Q8CII8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syne4Q8CII8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
Syne4Q8CII8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Syne4Q8CII8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syne4Q8CII8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Syne4Q8CII8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Syne4Q8CII8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Syne4Q8CII8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Syne4Q8CII8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Syne4Q8CII8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Syne4Q8CII8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Syne4Q8CII8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Syne4Q8CII8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Syne4Q8CII8 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.75■■□□□ 1.39
Syne4Q8CII8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Syne4Q8CII8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Syne4Q8CII8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Syne4Q8CII8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Syne4Q8CII8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Syne4Q8CII8 Gm26833-201ENSMUST00000180899 440 ntBASIC23.74■■□□□ 1.39
Syne4Q8CII8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.74■■□□□ 1.39
Syne4Q8CII8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Syne4Q8CII8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Syne4Q8CII8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Syne4Q8CII8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.74■■□□□ 1.39
Syne4Q8CII8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syne4Q8CII8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Syne4Q8CII8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Syne4Q8CII8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Syne4Q8CII8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syne4Q8CII8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syne4Q8CII8 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.73■■□□□ 1.39
Syne4Q8CII8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syne4Q8CII8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syne4Q8CII8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syne4Q8CII8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syne4Q8CII8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Syne4Q8CII8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Syne4Q8CII8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Syne4Q8CII8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.72■■□□□ 1.39
Syne4Q8CII8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Syne4Q8CII8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Syne4Q8CII8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Syne4Q8CII8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Syne4Q8CII8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Syne4Q8CII8 Gm26571-201ENSMUST00000181399 666 ntBASIC23.71■■□□□ 1.39
Syne4Q8CII8 Gm43060-201ENSMUST00000200621 289 ntBASIC23.71■■□□□ 1.39
Syne4Q8CII8 Gm10493-201ENSMUST00000097270 612 ntBASIC23.71■■□□□ 1.39
Syne4Q8CII8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Syne4Q8CII8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Syne4Q8CII8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Syne4Q8CII8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Syne4Q8CII8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.7■■□□□ 1.38
Syne4Q8CII8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Syne4Q8CII8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Syne4Q8CII8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.7■■□□□ 1.38
Syne4Q8CII8 Gm42569-201ENSMUST00000200539 472 ntBASIC23.7■■□□□ 1.38
Syne4Q8CII8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Syne4Q8CII8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Syne4Q8CII8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Syne4Q8CII8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.69■■□□□ 1.38
Syne4Q8CII8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
Syne4Q8CII8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms