Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh1Q8CGV4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh1Q8CGV4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rdh1Q8CGV4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh1Q8CGV4 Gm9870-201ENSMUST00000063874 645 ntBASIC20.28■□□□□ 0.84
Rdh1Q8CGV4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh1Q8CGV4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh1Q8CGV4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rdh1Q8CGV4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh1Q8CGV4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh1Q8CGV4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.27■□□□□ 0.84
Rdh1Q8CGV4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rdh1Q8CGV4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rdh1Q8CGV4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rdh1Q8CGV4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rdh1Q8CGV4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh1Q8CGV4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh1Q8CGV4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh1Q8CGV4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh1Q8CGV4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.22■□□□□ 0.83
Rdh1Q8CGV4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh1Q8CGV4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Gm7143-201ENSMUST00000222811 859 ntBASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms