Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh1Q8CGV4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh1Q8CGV4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rdh1Q8CGV4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh1Q8CGV4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh1Q8CGV4 Gm9870-201ENSMUST00000063874 645 ntBASIC20.28■□□□□ 0.84
Rdh1Q8CGV4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh1Q8CGV4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh1Q8CGV4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rdh1Q8CGV4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh1Q8CGV4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh1Q8CGV4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.27■□□□□ 0.84
Rdh1Q8CGV4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rdh1Q8CGV4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rdh1Q8CGV4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh1Q8CGV4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rdh1Q8CGV4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rdh1Q8CGV4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh1Q8CGV4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh1Q8CGV4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh1Q8CGV4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh1Q8CGV4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh1Q8CGV4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.22■□□□□ 0.83
Rdh1Q8CGV4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh1Q8CGV4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rdh1Q8CGV4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh1Q8CGV4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.19■□□□□ 0.82
Rdh1Q8CGV4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Gm7143-201ENSMUST00000222811 859 ntBASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.18■□□□□ 0.82
Rdh1Q8CGV4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rdh1Q8CGV4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms